Gene Pnap_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1589 
Symbol 
ID4686422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1672397 
End bp1673962 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content71% 
IMG OID639834592 
Producthypothetical protein 
Protein accessionYP_981824 
Protein GI121604495 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.510421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.752048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTGCC TGCGAAGCGC TGGTGCCCGC CACGCTGCTG TGGCTGCGCG TCTATCAGCA 
AAGCCAGCCG GAATTGTTCC GGATGGCGTC GTGAACCTTC CCCTTGGCGA GCCCCGCTTT
GCCGCGCTCG GCCCGGCCTA TGGGCAGCCG GTGGCGGCGC TGCCGCTGCC GGACGCGTTG
CGGCTGTACT TCAATGCCGC GCTGGCCGAT CAGATAGGGC TGGACCCGCG CTGGTGCCAA
AGCGCGGCCG CGCTGCCGCT GTTGACCGGC AACGCCGCCT GGCCCGGCCA GACGCCCAGC
GCGTCGGTCT ATGCCGGCCA CCAGTTTGGC GTCTGGGTCA GCCAGCTCGG GGATGGCCGC
GTGCTGACCC TGGCCGAATG GCGGGCGCCC GATGGCAGCC CGGTCGAGCT GCAACTCAAG
GGCGCTGGCC CCACGCCCTA TGCGCGCGGC AGCGATGGCC GCGCCACGCT GGCCTCGTCG
GTGCGCGAAC TGCTGGCCTG CGAGGCGCTG CATGCGCTGG GCGTGCCGAC CACCCGCGCC
CTGTCGCTGG CCGGCTCCAG TCTTTCGGTG CAGCGCGACG AGCTTGATAC CGCCGCCGTG
CTGGGCCGCA CCGCACCGTG CTTTGTGCGT TTTGGCCATT TTGAATTCCA TGCCCGCCAC
GGCACGCCGC AGCAGCTGGC ACTGCTTGCC GATCATGTCA TCGAGCACCA CTTTCCGTAT
CTGGCGAACC AGCCCCAGCG CCATGCCGCC TGGCTGGCCG AGGTGGTCGA GCTGACGGCC
GCGCTGTTCG CCCACTGGCA GACGCTGGGC TTTTGCCACG GCGTGCTGAA CACCGACAAC
CTCTCGGTGC TCGGCCTGAC GCTGGACTAC GGCCCTTACG GCTTCATGGA GCGCTTTCGA
CCGCACCATG TCTGCAACGC CTCCGACCAC GAAGGCCGCT ACGCCTACAC CGCGCAGCCG
GCCATCGGGC GCTGGAACTG CGAGCGCCTG CTGGGCGCCT GCGCCGGCCT GCTCGCCCCG
CAGCCCGAAG CCGCGCGCGA GCAGGCGCAG GCGCTGCTGG CGCGCTACGA CGAGGTGTAC
CGCCAGGAAG TGATGCGCCG CTGGCGCGCC AAGCTCGGGC TGCGCGAGGC ACGTGCCGGG
GACGCCGGCC TGCTGAACCG CTGGCTCACG CTGCTGCAGC GCGGCAAGGC CGATTTCACG
CTGGCTTTTC GCCGCCTGGC CGACGCCATT CAAATAGACC CGGCCGAGGC GCTGATCTGT
CTGCCCGCCG GACAGGACGC CGCGCTGCGC GACTGGCTCG ATGACTGGCG CGCCCGCCTG
GCCAGTGAAG GTGGCTCACC CGCCGGGCGC GCCAGCGCGA TGCGCCGCGT CAATCCCCGC
TACGTGCTGC GCAACCACCT GGCCCAGGCC GCGATTGAGG GCGCCCAGCG CGGATCGAGC
GTGGAACTGC ACCGCCTGCT GGCCGTGCTG GCGCGGCCGT TTGACGAGCA GCCGGGGGCG
GAGCACTACG CCGCGCCGCC GGCGCAGGGG CTGGAACTGG AACTGGAAAT CGGGTGTTCG
GCTTAG
 
Protein sequence
MVCLRSAGAR HAAVAARLSA KPAGIVPDGV VNLPLGEPRF AALGPAYGQP VAALPLPDAL 
RLYFNAALAD QIGLDPRWCQ SAAALPLLTG NAAWPGQTPS ASVYAGHQFG VWVSQLGDGR
VLTLAEWRAP DGSPVELQLK GAGPTPYARG SDGRATLASS VRELLACEAL HALGVPTTRA
LSLAGSSLSV QRDELDTAAV LGRTAPCFVR FGHFEFHARH GTPQQLALLA DHVIEHHFPY
LANQPQRHAA WLAEVVELTA ALFAHWQTLG FCHGVLNTDN LSVLGLTLDY GPYGFMERFR
PHHVCNASDH EGRYAYTAQP AIGRWNCERL LGACAGLLAP QPEAAREQAQ ALLARYDEVY
RQEVMRRWRA KLGLREARAG DAGLLNRWLT LLQRGKADFT LAFRRLADAI QIDPAEALIC
LPAGQDAALR DWLDDWRARL ASEGGSPAGR ASAMRRVNPR YVLRNHLAQA AIEGAQRGSS
VELHRLLAVL ARPFDEQPGA EHYAAPPAQG LELELEIGCS A