Gene Pnap_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1568 
Symbol 
ID4689795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1656469 
End bp1656921 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content68% 
IMG OID639834571 
Productscaffold protein 
Protein accessionYP_981803 
Protein GI121604474 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.497766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACA GCGATAAGGT CGTTGACCAC TACGAAAACC CGCGCAACGT CGGCGCCTTC 
GAGGCCGGCG ACGACAGCGT TGGCACCGGC ATGGTCGGCG CGCCCGCCTG CGGCGATGTG
ATGCGGCTGC AGATACGCGT CAACGCCGAG GGCGTGATCG AGGACGCCAA GTTCAAGACC
TACGGCTGCG GCTCGGCCAT CGCGTCGAGT TCGCTGGTGA CGGAATGGGT GCGCGGCCGC
ACGCTGGACG AAGCCCTGGC CATCAAGAAT TCCGACATCG CCGAAGAGCT GGCCCTGCCG
CCGGTCAAGA TCCACTGCTC CATCCTGGCC GAAGACGCCA TCAAGGCCGC AGTGGCCGAC
TTCCGCGCGC GCCACCCGGC CGGCTCCGGC GCCGCCACGA TCCTGACCGA GCAGCCCGTC
TGCGCCTCCA GCACGCCCGC CCCCACTCTC TAA
 
Protein sequence
MAYSDKVVDH YENPRNVGAF EAGDDSVGTG MVGAPACGDV MRLQIRVNAE GVIEDAKFKT 
YGCGSAIASS SLVTEWVRGR TLDEALAIKN SDIAEELALP PVKIHCSILA EDAIKAAVAD
FRARHPAGSG AATILTEQPV CASSTPAPTL