| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1560 |
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| Symbol | |
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| ID | 4689468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1646981 |
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| End bp | 1648879 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834563 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_981795 |
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| Protein GI | 121604466 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.288895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATT CAATCGCCAC TGTCTCGCTG TCTGGAATGC TGCGCGAGAA GCTGCAGGCA
GCAGCCGCTG CGCACTTCGA TGGCGTGGAA ATCTTTGAAA ACGACCTGCT GCAGTTCCCG
GGAACGCCGG CCGAGGTGCG CCGCATTTGC GAGGATCTGG GCTTGCGCAT CGACATGTTC
CAGCCGTTTC GTGACTTCGA CGGCACCACG CCCGCGCAGG TCGCTCGCAG TCTGGAACGC
GCCGAACGCA AGTTCGACGT GATGCAGGAG CTGGGCACTG AATTGATTCT GGTGTGCTCC
AACGTGCAGC CCGACGCGCT CGGCGATGTC GATCAACTCG CCGGGCAATT CCACCAGCTC
GCCGAACGCG CCGGCAGGCG CGGCATGCGC ATTGCCTACG AGGCGCTGGC CTGGGGCAGC
CAGGTCAAGC TCTGGTCCCA GGCCTGGAGC GTGGTCGAGC GCGTCAACCA CCCGCACATG
GGGCTGGCGC TGGACAGCTT TCACACGCTG TCGCTGCGCG ACGACCCGGG CGGCATCGCC
CGGCTGCCGG GCGAGAAGAT TTTCTTTGTC CAGCTGGCCG ATGCCCCGTG GGTGAACACC
GACGTGTTGA CGCACAGCCG CCATTACCGC TGCTTTCCGG GCCAGGGCGA GATGGAGGTG
ACCAGGTTCA CTGCGGCCGT CATCGAGTCG GGCTACAGCG GGCCGCTTTC GCTGGAAATC
TTCAACGATG AATTCCGCTC CGCGCCGGCG CGGGCCAATG CGGTCGATGC CAGGCGCTCG
CTGCTGTGGC TCGAAGACCA GGTGTGCCAG AGTCGGGCGA AGGATGCACC GCCTTGCAAG
GCGCCGCTGT TCGCGCCGCC GCCAGCGCCC GTGCTGACTG GATGGGCGTT CGTCGAGTTC
GCCGTGGACC CGGCCGCAGG CGGCCGGCTG GCCGCGTGGC TTCAGGCCAC TGGTTTTCAC
CGCATCGGCC ATCACCGCTC GAAGAAGGTT GATCTTTATG GCCAGGGCGA GGTGCGCATC
ATCGTCAATC TGGAAGAGGA TTCGCTGGCC CGCAGCCATT TTGAACAGCA CGGCACCTCG
GCCTGCGCCG TGGCGCTGGC CACGCCGGAT GTCGCCGGGG CGCTGGCGCG CGCCGAAGCC
TTGCTGTGCC CGCGTGTGAA CGGGCGTGTG GGTCAGAACG AGCTGACCAT TCCCTCCGTG
CGCGCACCCG ACGGCAGCCT GCTCTATTTT TGCGAAGCGC CGCAAGGTGG CCGCTACGCC
TTTGAAGCCG ACTTTGTGAT GGACGAATCC GCCCTGCACG GCGGTGCACT GGGTGACAGG
GCACGTTTCG ACCACCTGGT GCAGGCTGTG CCGGCCGGGC AGGTCGAGCC GTGGGTGCTG
TTCCATCGTG CGGTGCTGGG CCTGGCGCCC GAGCGCAACG TCGTGATGCA TGACCCCTAC
GGCGTGATCA GGAGCCGCGA GATTGAATCG ACCGACCGTG AAGTGCGCGT GTCCATCACT
GTTTCCGAAC GCGACAACAC CTCGGTGTCC CGTGCCGTGT CGAGCTTTCG TGGCGCTGGC
GTTCAGCAAA TTGCCATCGC AGTGACCGAC CTGGTGGCAA CGGCACGCGC ACTCAAGGCA
TCGGGCGCGC CGCTGCTGCC CGTGCCGGCC AACTACTACG ACGACCTGCT CGCCAGGTAC
GACATCGACG CCGGCTTGCT GGCGGCCATG CGCGAACTGG GCATCCTGTA CGACCGCGAA
GCGGACGGTG GCGAGTTCCT GCATTTGTAC CTCACGCCGT TCGACGACCG TTTCCATTTT
GAACTGGTCG AGCGACGCGC AGGCTACGCC GGCTATGGCG CGCCGAACGC CCCGTCGCGA
CTGGCGGCCA TGGCGCAGTG GCGCCAGGCG CAGCAGTGA
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| Protein sequence | MRHSIATVSL SGMLREKLQA AAAAHFDGVE IFENDLLQFP GTPAEVRRIC EDLGLRIDMF
QPFRDFDGTT PAQVARSLER AERKFDVMQE LGTELILVCS NVQPDALGDV DQLAGQFHQL
AERAGRRGMR IAYEALAWGS QVKLWSQAWS VVERVNHPHM GLALDSFHTL SLRDDPGGIA
RLPGEKIFFV QLADAPWVNT DVLTHSRHYR CFPGQGEMEV TRFTAAVIES GYSGPLSLEI
FNDEFRSAPA RANAVDARRS LLWLEDQVCQ SRAKDAPPCK APLFAPPPAP VLTGWAFVEF
AVDPAAGGRL AAWLQATGFH RIGHHRSKKV DLYGQGEVRI IVNLEEDSLA RSHFEQHGTS
ACAVALATPD VAGALARAEA LLCPRVNGRV GQNELTIPSV RAPDGSLLYF CEAPQGGRYA
FEADFVMDES ALHGGALGDR ARFDHLVQAV PAGQVEPWVL FHRAVLGLAP ERNVVMHDPY
GVIRSREIES TDREVRVSIT VSERDNTSVS RAVSSFRGAG VQQIAIAVTD LVATARALKA
SGAPLLPVPA NYYDDLLARY DIDAGLLAAM RELGILYDRE ADGGEFLHLY LTPFDDRFHF
ELVERRAGYA GYGAPNAPSR LAAMAQWRQA QQ
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