Gene Pnap_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1553 
Symbol 
ID4688753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1640638 
End bp1641123 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content61% 
IMG OID639834556 
Productdehydratase 
Protein accessionYP_981788 
Protein GI121604459 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC CGAATATCCA GTTCACCACG CCCGAAAAAT ACTGGGACGA CGCCCAGGTC 
GGCGACGAAT GCACCAGCCC GACCTATCTG GTGACTGCCG AGCGCATTGA CGCCTATGCC
GAACTCACCG GCGACTTCAC GCCCGTGCAT GTGGACGAGG AATACGCCAA CGCCTCGCAT
TTTGGCTGCC GCGTCGCCCA TGGCCTGATG GGGCTGTCGG TGGCCGACGG CCTGAAAACC
CAGTGCGAAT ACCGCTTTTT GCCCGGCATG TCGCTGGGCT GGACCTGGGA CTTTTTGCTG
CCGATCAGGA TCAACGACGT GCTGCACATC AAATTTCATG TCGAAAGCAT GCGGGCCTCC
AAAAGCAAGC CCGGCTGGGG CATTGTGATT TTGCCCGCCG AGCTGATCAA CCAGCACGGC
CAGGTGGTGC AAAAAGGCGA GCACCGCCTG ATGGTGCCGC GCCGCCCGAC GGCAGCCACC
GCCTGA
 
Protein sequence
MPKPNIQFTT PEKYWDDAQV GDECTSPTYL VTAERIDAYA ELTGDFTPVH VDEEYANASH 
FGCRVAHGLM GLSVADGLKT QCEYRFLPGM SLGWTWDFLL PIRINDVLHI KFHVESMRAS
KSKPGWGIVI LPAELINQHG QVVQKGEHRL MVPRRPTAAT A