| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1550 |
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| Symbol | |
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| ID | 4687726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1638184 |
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| End bp | 1639185 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834553 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_981785 |
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| Protein GI | 121604456 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.135746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGTTT TGCACCTTCA TGTTGTAAAC AAAGTGCCTG CAATACACTT CATTGCGAAT
TTTTATGGCC AGAAGGAATC CACCGTCATG ACCCAACCCG ACAAAGGCGA TACCGCACTT
GCCGATATCA AGCTGCTGCG GCTGCTGGAT TTGCTCTACA ACACGCGCAG CGTGACGCGC
GCCGCAGAGC AGCTGGGGCA AAGCCAGCCC ACGGTCAGCA TCTGGCTGGC CCGGCTGCGC
AGGCAGCTCG GTGACCCGCT GTTCGTGCGC ACACCCGAAG GCATGCTGCC GACGCCGCGC
ACCGACGCGC TGATCGCCAC GGTGCGCGAG GTGCTGGAGG GACTGCGCCG CCTGTCCGAA
TCGGAATCGC GGTTTGACCC GGCCACGGCG CAGCGCGGGT TCCGCATCTT CATGACCGAC
GCCAGCCACA TCACGCTGCT GCCGCGCCTG TTTTCCCATG TGCGCGCACT GGCGCCCCAG
GTCCGGCTGG AGGCGGCGAC CATCGACGCG CGCATGGCGC CGGCGCTGCA GTCGGGCGAA
GGCGATCTGG CGCTGGGCCT GGTGCCGGGG CTGGAGGCCG GTTTTTACCA GCAGACCCTG
TTCGGCCAGG ACTGGATTTG CCTGTGCAAC GCCCGCCACC CGCGCATCGG GGAAATGTTC
ACACTGCAGG ACTACGCGGC CGAGGCGCAC ATCGGCATCG TGTCGGGCAC GGGCTACCAG
TTGCTCGACG GTGCGCTGAA AAGCCAGGGC ATTGCGCGGC GCGTGCTGCT GGAATTGCCG
GGTTTTCTGG GCCTCGCCGC CATCTTGTCC ACCAGCGACC TGGTCGCCAC CCTGCCCCGC
CACATCGGTG AAACGCTGGC GAACGCGGCC GGCCTGCGCG TGCTGCCCTG CCCGTTCGAG
ATTCCCGGCT TCACCGTCAA GCAGTACTGG CATGCCAGGT ACCACCACGA TGCCGGCAAC
CGATGGCTGC GCGGCGTGTG CGCCGAATTA TTCATGAAAT AG
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| Protein sequence | MVVLHLHVVN KVPAIHFIAN FYGQKESTVM TQPDKGDTAL ADIKLLRLLD LLYNTRSVTR
AAEQLGQSQP TVSIWLARLR RQLGDPLFVR TPEGMLPTPR TDALIATVRE VLEGLRRLSE
SESRFDPATA QRGFRIFMTD ASHITLLPRL FSHVRALAPQ VRLEAATIDA RMAPALQSGE
GDLALGLVPG LEAGFYQQTL FGQDWICLCN ARHPRIGEMF TLQDYAAEAH IGIVSGTGYQ
LLDGALKSQG IARRVLLELP GFLGLAAILS TSDLVATLPR HIGETLANAA GLRVLPCPFE
IPGFTVKQYW HARYHHDAGN RWLRGVCAEL FMK
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