| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1472 |
|---|
| Symbol | |
|---|
| ID | 4689530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1559559 |
|---|
| End bp | 1560536 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639834475 |
|---|
| Product | guanosine 5'-monophosphate oxidoreductase |
|---|
| Protein accession | YP_981707 |
|---|
| Protein GI | 121604378 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
|---|
| TIGRFAM ID | [TIGR01306] guanosine monophosphate reductase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.601971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.285892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCT TCGACTACGA CAACATCTTG CTGCTGCCGC GCAAATGCCG CGTGGAGAGC
CGCGCCGAAT GCGATGCCAG CGTGACGCTG GGCCAGCGCA GTTTTCGCAT CCCGGTGGTG
CCGGCCAACA TGAAGACGGT GGTCAACGAA GACATCTGCG TCTGGATGGC GCAAAACGGC
TACTTCTACG TCATGCACCG CTTCGACCTG GACAATCTGC AGTTCGTGCG CGACATGCAG
GCGCGGGGCG TGTACGCCTC GATCTCGCTG GGCGTGAAGC AGCCCGACTA CGACACGGTG
GACAGGCTGG TCGCCGAAGG TTTGGCGCCG GAATACATCA CCATCGACAT TGCCCATGGC
CATGCCGATA CGGTGCGCAA AATGATCGCG TACCTGAAGA ACCATCTGCC CGAATCATTC
GTGATTGCCG GCAACGTGGC CACGCCCGAA GCGGTGATCG ACCTGGAAAA CTGGGGCGCC
GACGCGACCA AGGTCGGCAT CGGCCCCGGC AAGGTCTGCA TCACCAAGAT GAAGACCGGC
TTTGGCACCG GCGGCTGGCA GCTGTCGGCG CTCAAGTGGT GCGCCCGGGT GGCGACCAAG
CCCATCATTG CCGACGGCGG CATCCGCGAG CACGGCGACA TCGCCAAGTC CATCCGCTTT
GGCGCGACGA TGGTGATGAT CGGCTCGATG CTGGCCGGCC TGGAGGAAAG CCCGGGTCAG
ACCGTCGAGG TCGATGGCAA GCTGTTCAAG GAATACTACG GCAGTGCCTC GGACTTCAAC
AAGGGCGAGT ACAAGCACGT CGAAGGCAAG CGCATCCTGG AGCCGATCAA GGGCAAGCTG
GTCGATACGC TGCGCGAGAT GGAGGAAGAC GTGCAAAGCG CCATCAGCTA CGCGGGCGGC
ACCCGGCTCA TGGACATCCG CAAGGTGAAC TACGTGGTGC TGGGCGGCAA GAACTCGAAT
GAAGACCTGA TGATGTAA
|
|---|
| Protein sequence | MEIFDYDNIL LLPRKCRVES RAECDASVTL GQRSFRIPVV PANMKTVVNE DICVWMAQNG
YFYVMHRFDL DNLQFVRDMQ ARGVYASISL GVKQPDYDTV DRLVAEGLAP EYITIDIAHG
HADTVRKMIA YLKNHLPESF VIAGNVATPE AVIDLENWGA DATKVGIGPG KVCITKMKTG
FGTGGWQLSA LKWCARVATK PIIADGGIRE HGDIAKSIRF GATMVMIGSM LAGLEESPGQ
TVEVDGKLFK EYYGSASDFN KGEYKHVEGK RILEPIKGKL VDTLREMEED VQSAISYAGG
TRLMDIRKVN YVVLGGKNSN EDLMM
|
|---|
| |