Gene Pnap_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1465 
Symbol 
ID4687997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1552115 
End bp1552828 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID639834468 
ProductNUDIX hydrolase 
Protein accessionYP_981700 
Protein GI121604371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.720683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG CCAAGCCCTT GTCTTTACCC CTGTTTGATC CCCGCTCCAT TCCTGTACTG 
GGAATTGACA GCCACCTGGC TGGCATCGGG CTGGACCGGC TCACGCCGCA AGCCCTGCGT
GACCGGTTCA GGCATCCGCC GATGTGGACG CCCGAGCACA GTGTGGAAAA GAAGTTTTCC
GACCGCCCAC CCGCGCTGGC TGCGGTGCTG CTGCCCTTGG TGATGCGCGA CGAACTCATG
CTGCTGCTGA CCGAGCGTTC CACGAACCTG TCCACCCATT CCGGCCAGAT CGCCTTTCCG
GGCGGCCGTA CCGACGAGGC CGACCGGGAT GCGGTCGATA CCGCCCTGCG TGAGGCAGAG
GAAGAGGTCG CCTTGCCGCG CCATCATGTG GAGGTTCTGG GAACCTTGCC CACCTATGTC
ACGGGCTCGG CCTTCATCAT CACGCCGGTC GTCGCCCTGG TAAAGCCGGG CTTTCAGCTG
CAACCTAATC CTGGGGAAGT GGCCGATGTG TTTGAAGTGC CGCTTGGGTT TTTGATGAAT
CCTGCTCATC ACCGGCGCCA CGAAACCGAG TTCGGCGGCG TACTTCGCCA GTGGCTTTCC
ATGCCCTACA CCGAACCGAT GGGCGAGGCG GCTGGCAGCG AATCCAGGGA GCGCTACATC
TGGGGCGCGA CCGCCGGCAT GCTGCGAAAC TTCTACCGTT TCCTCAGCGC CTGA
 
Protein sequence
MNPAKPLSLP LFDPRSIPVL GIDSHLAGIG LDRLTPQALR DRFRHPPMWT PEHSVEKKFS 
DRPPALAAVL LPLVMRDELM LLLTERSTNL STHSGQIAFP GGRTDEADRD AVDTALREAE
EEVALPRHHV EVLGTLPTYV TGSAFIITPV VALVKPGFQL QPNPGEVADV FEVPLGFLMN
PAHHRRHETE FGGVLRQWLS MPYTEPMGEA AGSESRERYI WGATAGMLRN FYRFLSA