| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1462 |
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| Symbol | rimM |
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| ID | 4689293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1550061 |
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| End bp | 1550669 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834465 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_981697 |
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| Protein GI | 121604368 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGCCTG GCCTTCAACC GTCCCTGGGC TTGACCTCGT CAAGCCTGCC TGACGACGCG
CTTGAGGTTG GGCGCATTCT GGATGCCTGG GGTGTCAAGG GCTGGGTCAA GATACTGCCG
CACAGCACGG ATCCGGAAGC ACTCTTTTCA GCTAAAACCT GGTACTTGCA GACGCCTGAC
GTCAAGTTTC GGCCGGGTTT CAGCCTTTTT TCGGGGACGG TCTCGCTGAA AGTGGATGAG
GCAAAAATCC ATTCCGGCGC GGTGGTTGCC AAATTTTCCG GTCTTGACGA CCGCGATGCG
GCTGAAGCCC TGCGCGGCGC CCGGATTTTT CTCTCGCGCA GTAGCTTTCC GGCTGCTTCC
GCCGATGAAT ATTATTGGGT CGATCTGATC GGCCTGAACG TGCTCAACCG TGAAGGTGTC
GCCCTGGGCT GCGTGCGCGA CCTGATGGCG ACCGGCCCGC ATTCGGTGCT GTGCGTCGAA
TACGCCAGCA CCCAGGAAGA CGGCACCAGC GCAACTGCCG AACGCATGAT TCCCTTCGTC
GCAGCCTATG TCGATAAAGT TGACATCGCC GGCAAGTGCA TCACCGTTGA CTGGCAACCC
GACTATTGA
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| Protein sequence | MRPGLQPSLG LTSSSLPDDA LEVGRILDAW GVKGWVKILP HSTDPEALFS AKTWYLQTPD
VKFRPGFSLF SGTVSLKVDE AKIHSGAVVA KFSGLDDRDA AEALRGARIF LSRSSFPAAS
ADEYYWVDLI GLNVLNREGV ALGCVRDLMA TGPHSVLCVE YASTQEDGTS ATAERMIPFV
AAYVDKVDIA GKCITVDWQP DY
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