| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1455 |
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| Symbol | |
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| ID | 4687257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1545476 |
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| End bp | 1546258 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834458 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_981690 |
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| Protein GI | 121604361 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.271159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCA ACCCACGCAT CAACGACTGG CAGGGCCGTC GCGCCTGGCT GGTGGGCGCC
TCCAGCGGCA TAGGGCGCGC CACGGCATCG GCCCTGCACG CGCGCGGTGC GCAGGTGGTG
GTGTCGGCGC GCGGCGAAGC GGCACTGCAG AGCTTTGTCG ATCAGCACCC CGGCAGCAGG
GCACTGCCGC TCGACACCGC CCGCCGCGAG GACGTGCAGG CAGCGGCGAC CCGACTGCTG
GCAGACGGGC CGCTGGGCAT GGTCTTTTAC TGTGCCGGCC ATTACCGGGA GATGCGCGCC
ACAGCCTTCG ATCTGGACGA GATGCTGCGA CACCAGCAGG TCAACGTGAC CGGCGCGCTC
CATGTGCTGG GCGTTGTACT GCCCGCCATG GTAGAAGCCG CGCGTCATGG ACAAGCCGGC
CACCTGAGCC TGGTCAGCAG CGTTGCCGGC TTTCGCGGTC TGCCCAAAAG CCTGGCCTAT
GGGCCCACGA AGGCGGCGCT GATCAACCTG GCCGAGACGC TGTACCTGGA CCTGCACGAC
TTGGGATTGG GCGTGAGCGT GATCAACCCC GGTTTCGTGG CCACGCCGCT GACAGCCGGC
AACGACTTCA GCATGCCGGC GCTGATCTCG CCCGAGGCGG CAGCCACGGC CATACTGCAG
GGCTGGGCGC GGGGCGACTT CGACATCCAC TTCCCCAAGC GCTTCACCCG GGTCATGAAG
CTGCTGCGGC TGCTGCCCTA CAGTTGGTAC TTTCCAGCCA TTCGACGCTT TACCGGGCGG
TAA
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| Protein sequence | MSLNPRINDW QGRRAWLVGA SSGIGRATAS ALHARGAQVV VSARGEAALQ SFVDQHPGSR
ALPLDTARRE DVQAAATRLL ADGPLGMVFY CAGHYREMRA TAFDLDEMLR HQQVNVTGAL
HVLGVVLPAM VEAARHGQAG HLSLVSSVAG FRGLPKSLAY GPTKAALINL AETLYLDLHD
LGLGVSVINP GFVATPLTAG NDFSMPALIS PEAAATAILQ GWARGDFDIH FPKRFTRVMK
LLRLLPYSWY FPAIRRFTGR
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