Gene Pnap_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1450 
Symbol 
ID4689377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1540981 
End bp1541766 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID639834453 
Producthypothetical protein 
Protein accessionYP_981685 
Protein GI121604356 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGC CTGCGCCCCG CGTGGCTGCC CCGCTCATCG GCTTTGGCCA GGTGCGCCAC 
ACGCGGCTGC GCCCCAGCCA CCATGCGTTT GCCTACGCCA CTTTCTTTCT GATGCTGCCC
ATGCGCAGCC TGCAGGCGGG CAGTGATGTG CTGGCCATCA ACCGGCGCGG CGCGCTGAGC
TTTCATGACA CCGACCACGG CGACGGCCGC AGTGCGAAGG AGGGTGGCGC GCTTGCCTGG
ATCGACGAAT TGCTGCGCGC CGAAGGCATT GAAGATGCCA CGGGCGAAAT CTGGCTGCAC
TGTTATCCGC GCGTGCTGGG CTACACCTTT AAACCCGTAA GTTTCTGGTA TTGCCACCGT
ACTGACTGCA GCCTGCGCGC CATCGTGGTC GAGGTCAACA ACACCTTTGG CGAGCGCCAC
TGCTACCTGC TGGACAAGCC GTGCTACGGC ATGGAGCTGA ACGCTCGCAA GGTGTTTCAT
GTGTCACCTT TCTGCGAGGT GAGCGGCGGT TACAGGTTCC GCTTTCTGCG CACCCGGCAC
GGGGGTGAAG AGCGCACGGT GGTGCGCATC GACCACGACG ACGCCAGTGG CCCGCTGCTG
CAAACCAGCG TCTGCGGCAC GCTGCTGCTG GTCAGCCGGA GCACCCTGCG CCGCGCCCTC
TGGGGCTATC CGGCCATGAC CCTGGCCGTG ATGGCCCGCA TCCACTGGCA GGCGCTCAGG
CTCTGGCTCA AGCGCGTACG TTTTCACCGC AAGCCCGAAG CGCCTGCCAC CGGCGTGACC
CGCTGA
 
Protein sequence
MSQPAPRVAA PLIGFGQVRH TRLRPSHHAF AYATFFLMLP MRSLQAGSDV LAINRRGALS 
FHDTDHGDGR SAKEGGALAW IDELLRAEGI EDATGEIWLH CYPRVLGYTF KPVSFWYCHR
TDCSLRAIVV EVNNTFGERH CYLLDKPCYG MELNARKVFH VSPFCEVSGG YRFRFLRTRH
GGEERTVVRI DHDDASGPLL QTSVCGTLLL VSRSTLRRAL WGYPAMTLAV MARIHWQALR
LWLKRVRFHR KPEAPATGVT R