| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1442 |
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| Symbol | |
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| ID | 4686681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1530152 |
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| End bp | 1531972 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834445 |
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| Product | ABC transporter related |
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| Protein accession | YP_981677 |
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| Protein GI | 121604348 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTT CATCTGTTTC TTCCGTTTCT CCCCTGCCCT CCAGCGCAGC CAGTGCTGCA
CCGGCCAAAG CCTCGCCCCG CTCCCTGTCG GGCCTGACGC CGTTTCTGCG CCCCTACCGG
GGACGGATTG GGCTGGCGGT GCTTTTCCTG GTGATGGCGG CGATTGCCAC GCTGGTGTTT
CCGCTGGCGC TGCGCGGCCT GATCGACGGC GGCATGGGCG GCGCCGGCAA GGGCGAGCAG
CTGATGGCGC TGCGCAACCA CTTCTTCGAG CTGTTCGGCG TCGCTGCCGC GCTGGGTCTT
TTTTCCGCCG GACGGTTCTA CACCGTCAGC TGGCTCGGCG AGCGGGTCAC GGCCGATATT
CGCAATGCCG TGTATTCGCA TGTGGTGCGG CAAAGCCCCG AGTTTTTTGA AACCACGCAG
ACCGGCGAGG TGCTGTCGCG GCTGACCGGC GACACCACGC TGGTGCAGAC GGTGGTGGGC
TCCTCGCTCA GCATGGGCCT GCGCAACGCC GTCATGGGCG CGGGCGCGCT CGGCATGCTG
GTGGTCACCA ACCCGTACCT GATGGTGCAG GTGCTGGGCG TGCTGCTGCT GATCGTCGCG
CCCTCGGTGT GGTTCGGGCG GCGCGTGCGC AAGCTCTCGC GCGCCAGCCA GGACCGCGTG
GCCGACTCCA GCGCGATTGC CGCCGAAGTG CTCAACGCCA TTCCGGTGGT GCAAAGCTAC
ACCGCCGAAG CCCGGGAAGC CGCGCGCTTC GACCAGTCAA CCACGGACGC GTTCATCACC
GCGATTCGCC GCACCAAGGC GCGCTCGGTG CTGGTGGCCT TCATCATCAT CGCCACGTCG
GCGGCGCTGC TGTGGGGCCT GTACCAGGGA ACGCAGGCGG TGATGCGCGG CGACATTTCC
GCCGGCCACC TGGGCCAGAC GGTGGTGTAT GTGATCATTC TGGCCAGTTC GGCAGCCGTG
CTGGGCGAGG TGTATGGCGA CCTGCTGCGC GCGGCCGGCG CCACCGAGCG ACTGATGGAA
CTGCTGGAAA CCCGCTCACC CGTGACTTCA CCGTCAAATC CGGTTCCTGC GCAGGTGGTA
CGGGCGGGTA GTGCTATCAA ATTTAAAGCA GTCACGTTTC ACTATCCGTC CCGTCCGACG
CAGCCGGCCC TGACCGATTT CAGCTTGAGC GTGGCGCCTG GCGAAACCGT TGCCATCGTC
GGGCCGAGCG GCGCCGGCAA AAGCACGGTG TTCCAGTTGC TGCTGCGGTT TTACGACCCC
GCCTCGGGCC GGATTGAACT GGACGGCGTT CGGACGGCCG ACATGTCGCT GCAAGACCTG
CGCGGGCGCA TCGGGCTGGT GCCACAGGAC GCGGTGATTT TCTCGACCAG CGCACTCGAA
AACATCCGCT ACGGCAAGCC CGAGGCGAGC GATGAAGAAG TCAAGTCGGC CGCACAGGCC
GCGTTTGCGC ATGAATTCAT CACTGCGCTG CCCGAAGGCT ACGACACCTT TCTGGGCGAA
CGCGGCGTGC GCCTTTCCGG CGGGCAGCGC CAGCGCATCG CGATTGCGCG CGCCATGCTG
AAAAACTCGC CGCTGCTGCT GCTTGACGAA GCCACCAGCG CACTCGATGC CGAAAGCGAA
CGCATGGTGC AGGCGGCGCT CGAATCCGCC ATGAAAGGCC GCACCACGCT GGTGATTGCG
CACCGCCTGG CCACGGTGCA GCAGGCCAGC CGCATCCTGG TGCTCGACCA TGGCAGGCTG
GTGGAACAAG GCACGCATGC GGAACTGGTG CGCCAGGGTG GCATTTATGC ACGGCTGGCG
GCACTGCAGT TCAACGTCTG A
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| Protein sequence | MATSSVSSVS PLPSSAASAA PAKASPRSLS GLTPFLRPYR GRIGLAVLFL VMAAIATLVF
PLALRGLIDG GMGGAGKGEQ LMALRNHFFE LFGVAAALGL FSAGRFYTVS WLGERVTADI
RNAVYSHVVR QSPEFFETTQ TGEVLSRLTG DTTLVQTVVG SSLSMGLRNA VMGAGALGML
VVTNPYLMVQ VLGVLLLIVA PSVWFGRRVR KLSRASQDRV ADSSAIAAEV LNAIPVVQSY
TAEAREAARF DQSTTDAFIT AIRRTKARSV LVAFIIIATS AALLWGLYQG TQAVMRGDIS
AGHLGQTVVY VIILASSAAV LGEVYGDLLR AAGATERLME LLETRSPVTS PSNPVPAQVV
RAGSAIKFKA VTFHYPSRPT QPALTDFSLS VAPGETVAIV GPSGAGKSTV FQLLLRFYDP
ASGRIELDGV RTADMSLQDL RGRIGLVPQD AVIFSTSALE NIRYGKPEAS DEEVKSAAQA
AFAHEFITAL PEGYDTFLGE RGVRLSGGQR QRIAIARAML KNSPLLLLDE ATSALDAESE
RMVQAALESA MKGRTTLVIA HRLATVQQAS RILVLDHGRL VEQGTHAELV RQGGIYARLA
ALQFNV
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