| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1427 |
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| Symbol | |
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| ID | 4686098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1514175 |
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| End bp | 1515428 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639834430 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_981662 |
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| Protein GI | 121604333 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.448612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA TCAAAAACTA CACGCTCAAT TTTGGACCGC AGCATCCGGC CGCGCATGGT
GTTTTACGTC TGGTGCTGGA ACTTGATGGC GAAGTCATCC AGCGCGCTGA CCCGCATATC
GGGTTGCTGC ACCGTGCCAC CGAAAAACTG GCCGAAAGCA AGACTTACAT TCAGTCGCTG
CCTTATATGG ATCGGCTCGA CTATGTGTCG ATGATGTCGA ATGAGCATGC TTATTGCTTG
GCTATCGAGA AGCTGCTGGG TGTTGATGTC CCGATTCGTG CGCAGTACAT CCGTGTGATG
TTCTCGGAGA TCACCCGTCT GCTAAATCAC CTGATGTGGC TGGGCGCACA CGGTCTGGAC
TGTGGCGCGA TGAACATGCT GATCTACTGC TTTCGTGAAC GCGAAGTGCT CTTTGACATG
TACGAGGCCG TATCGGGCGC CCGCATGCAT GCGGCCTACT TCCGTCCTGG CGGTGTCTAC
CGCGATTTGC CGGAAAGCAT GTCGCAGTAC AAGGTCAACA AGATACGGAA TGCCAAGGCG
ATTGATGCCT TGAATGAAAA TCGCCAGGGT TCACTGCTCG ATTTTATTGA TGACTTCGTG
ACCAAATTCC CCAAGTTGGT TGATGAATAC GAAACCCTGC TAACCGACAA CCGTATCTGG
AAGCAACGCA CGGTTGGTGT TGGCGTGGTG TCACCGGAGC GCGCGCTCAA TCTTGGCTTT
ACCGGTCCTA TGCTTAGAGG CTCCGGCTTC GCCTGGGATC TGCGAAAACA GCAGCCCTAT
GAAGTCTATG CACAGATGGA CTTCGATATT CCGGTAGGTA AAACGGGTGA CTGCTATGAC
CGCTACCTGG TCCGTGTCGC GGAGATGCGC CAATCCAACC GCATCATCAA GCAGTGCGTC
GATTGGCTGC GGGTTAATTC CGGCCCGGTC ATCACCAGCA ACCACAAGGT GGCTCCTCCT
AACCGAGAGT CCATGAAATC CAACATGGAA GAGCTGATCC ACCATTTCAA GCTTTTCACC
GAAGGTTTCC ATGTGCCGGA AGGCGAGGCT TATGCCGCAG TGGAGCATCC CAAGGGAGAG
TTCGGCATTT ACATCGTCAG CGATGGCGCG AACAAGCCTT ATCGCCTGAA AATTCGTCCG
CCAGGCTTTT CGCATCTGGC CGCCATGGAT GAGATGTCGC GCGGACACAT GATTGCCGAT
GCTGTTGCCG TGATTGGCAC CATGGACATC GTGTTCGGTG AAATTGACCG CTAA
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| Protein sequence | MAEIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AESKTYIQSL
PYMDRLDYVS MMSNEHAYCL AIEKLLGVDV PIRAQYIRVM FSEITRLLNH LMWLGAHGLD
CGAMNMLIYC FREREVLFDM YEAVSGARMH AAYFRPGGVY RDLPESMSQY KVNKIRNAKA
IDALNENRQG SLLDFIDDFV TKFPKLVDEY ETLLTDNRIW KQRTVGVGVV SPERALNLGF
TGPMLRGSGF AWDLRKQQPY EVYAQMDFDI PVGKTGDCYD RYLVRVAEMR QSNRIIKQCV
DWLRVNSGPV ITSNHKVAPP NRESMKSNME ELIHHFKLFT EGFHVPEGEA YAAVEHPKGE
FGIYIVSDGA NKPYRLKIRP PGFSHLAAMD EMSRGHMIAD AVAVIGTMDI VFGEIDR
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