Gene Pnap_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1419 
SymbolrpsO 
ID4687626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1507384 
End bp1507650 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content58% 
IMG OID639834421 
Product30S ribosomal protein S15 
Protein accessionYP_981654 
Protein GI121604325 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID[TIGR00952] ribosomal protein S15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.22503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.956384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAA AATCAATCAA GGCTGAGATT GTCAAGGACA ACGCCCGTTC CGCCCTAGAT 
ACCGGCAGTC CTGAAGTCCA GGTCGGCCTG CTGACCGGCC GCATCAATGA ACTGATGCCC
CATTTCAAGA CCCACGCCAA GGACCACCAC GGCCGCCGTG GCCTGCTGCG CATGGTCAGC
CGTCGCCGCA AGCTGCTGGA CTACCTGAAG TCCAAGGATG CTTCCCGTTA TGTTGCGCTG
ATCGCCAAGC TTGGCCTGCG TAAATAA
 
Protein sequence
MIAKSIKAEI VKDNARSALD TGSPEVQVGL LTGRINELMP HFKTHAKDHH GRRGLLRMVS 
RRRKLLDYLK SKDASRYVAL IAKLGLRK