Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1411 |
Symbol | |
ID | 4690077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1498112 |
End bp | 1499413 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639834413 |
Product | major facilitator superfamily transporter |
Protein accession | YP_981646 |
Protein GI | 121604317 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.865704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGCGGCA CCAGTTTTTT CTTGTTTGGC AATCCACCGT GCCGCCACAG CGCTGGCAAA AGCACCTATT TTCACAAGAA CCCCTCCGTG AACTTCTTCA AAGCATTCCT TAAATCGGGG CACTCCCCTA CCCTGTTTGC CGCATTTTTG TATTTTTCGT TTTCCTGCTG CATCTGGGTG CTCAACGGCG CCATGGCGCC CTTCATTTCC GAAACCTTCG GCCTGAGCCC GGCGCAAAAG GGGCTGATGC TGTCGGTTCC CATCATTGCC GGCGCGCTGA TGCGTTTTCC GCTCGGCCTG CTGTCGCAGT ACATCGGCCG CAAGAACGCC ACGCTGGTGG AGATGGGCCT GATTGCGGTG GCCATGCTGT TCGGCTTCTT TTTCGTCAAG AGCTTCAACG ACCTGCTGGC CATGGGCGTG CTGCTGGGCA TTGCCGGCGC CAGCTTCGGC GTGGCGCTGT CGCTGGGCTC GGGCTCGTTT CCGGCCCGGC ACAAGGGCCT GGCGATGGGC CTGGTGGGCG CCGGCAACGT CGGCACTGCC GTGTCGGTGC TGATCGCGCC GCCACTGGCG CAGGCCTTCG GCTGGGTCAC GGTGTACGGC ATTGCCGCCG CCGCCATCAG CATTCCGATG ATCGTGATGA TCGTGTTCGC CAAGGAACCC GACGACCTCG ACAAGCACGC CAGCTTCAAG CAGCACATCG CCTGCCTGTA TGAAAAAGAC GGCTGGGCCT TCAGCCTGAT TTACGCGGTG ACGTTTGGCG GCTTCATCGG CCTGGCGACG TTTTTGCCGA CCTATTACTA CGACCAGTTC TCGGTCAGCA AGGTGCAGGC CGGCCAGCTC ACCATGCTGG CGGCGTTCAT GGGCGCTGCG CTGCGCGTGT TCGGCGGCTG GATCTCTGAC CGCTGGGGCG GCATCAACAC CCTGAGCGTG GTGCTGGTGA CGGTGGCCGT CACCCTGACA ATGTGCGGGA TGGCCGGCGG CTCGCTGGTG GCCACCACGC TGCTGGTGAT GCTGTGCTTT GCCGCGCTGG GCGCGGGCAA CGGCGCCGTG TTCCAGCTGG TGCCGCTGCG CTGGCCGCTG GCCACGGCCG TGGCCGGCTC GATGATCGGC GAGATCGGCG CCCTGGGCGG CGGCCTGGTG CCCAGCGCGA TGGGCCTGTC CAAACAGTAT GGCGGCAGTT ATGCCTGGGG CTTTTTCCTG TTTGCCAGCC TGGCCATGAT GATGCTGGTG ATGCTGCGCG TGATGCAGAT CCGCTGGACC CGCACCTGGG CCGAAAAGGG CGGGCGGGCG CGCACCGCTT AA
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Protein sequence | MGGTSFFLFG NPPCRHSAGK STYFHKNPSV NFFKAFLKSG HSPTLFAAFL YFSFSCCIWV LNGAMAPFIS ETFGLSPAQK GLMLSVPIIA GALMRFPLGL LSQYIGRKNA TLVEMGLIAV AMLFGFFFVK SFNDLLAMGV LLGIAGASFG VALSLGSGSF PARHKGLAMG LVGAGNVGTA VSVLIAPPLA QAFGWVTVYG IAAAAISIPM IVMIVFAKEP DDLDKHASFK QHIACLYEKD GWAFSLIYAV TFGGFIGLAT FLPTYYYDQF SVSKVQAGQL TMLAAFMGAA LRVFGGWISD RWGGINTLSV VLVTVAVTLT MCGMAGGSLV ATTLLVMLCF AALGAGNGAV FQLVPLRWPL ATAVAGSMIG EIGALGGGLV PSAMGLSKQY GGSYAWGFFL FASLAMMMLV MLRVMQIRWT RTWAEKGGRA RTA
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