Gene Pnap_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1411 
Symbol 
ID4690077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1498112 
End bp1499413 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content64% 
IMG OID639834413 
Productmajor facilitator superfamily transporter 
Protein accessionYP_981646 
Protein GI121604317 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.865704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCGGCA CCAGTTTTTT CTTGTTTGGC AATCCACCGT GCCGCCACAG CGCTGGCAAA 
AGCACCTATT TTCACAAGAA CCCCTCCGTG AACTTCTTCA AAGCATTCCT TAAATCGGGG
CACTCCCCTA CCCTGTTTGC CGCATTTTTG TATTTTTCGT TTTCCTGCTG CATCTGGGTG
CTCAACGGCG CCATGGCGCC CTTCATTTCC GAAACCTTCG GCCTGAGCCC GGCGCAAAAG
GGGCTGATGC TGTCGGTTCC CATCATTGCC GGCGCGCTGA TGCGTTTTCC GCTCGGCCTG
CTGTCGCAGT ACATCGGCCG CAAGAACGCC ACGCTGGTGG AGATGGGCCT GATTGCGGTG
GCCATGCTGT TCGGCTTCTT TTTCGTCAAG AGCTTCAACG ACCTGCTGGC CATGGGCGTG
CTGCTGGGCA TTGCCGGCGC CAGCTTCGGC GTGGCGCTGT CGCTGGGCTC GGGCTCGTTT
CCGGCCCGGC ACAAGGGCCT GGCGATGGGC CTGGTGGGCG CCGGCAACGT CGGCACTGCC
GTGTCGGTGC TGATCGCGCC GCCACTGGCG CAGGCCTTCG GCTGGGTCAC GGTGTACGGC
ATTGCCGCCG CCGCCATCAG CATTCCGATG ATCGTGATGA TCGTGTTCGC CAAGGAACCC
GACGACCTCG ACAAGCACGC CAGCTTCAAG CAGCACATCG CCTGCCTGTA TGAAAAAGAC
GGCTGGGCCT TCAGCCTGAT TTACGCGGTG ACGTTTGGCG GCTTCATCGG CCTGGCGACG
TTTTTGCCGA CCTATTACTA CGACCAGTTC TCGGTCAGCA AGGTGCAGGC CGGCCAGCTC
ACCATGCTGG CGGCGTTCAT GGGCGCTGCG CTGCGCGTGT TCGGCGGCTG GATCTCTGAC
CGCTGGGGCG GCATCAACAC CCTGAGCGTG GTGCTGGTGA CGGTGGCCGT CACCCTGACA
ATGTGCGGGA TGGCCGGCGG CTCGCTGGTG GCCACCACGC TGCTGGTGAT GCTGTGCTTT
GCCGCGCTGG GCGCGGGCAA CGGCGCCGTG TTCCAGCTGG TGCCGCTGCG CTGGCCGCTG
GCCACGGCCG TGGCCGGCTC GATGATCGGC GAGATCGGCG CCCTGGGCGG CGGCCTGGTG
CCCAGCGCGA TGGGCCTGTC CAAACAGTAT GGCGGCAGTT ATGCCTGGGG CTTTTTCCTG
TTTGCCAGCC TGGCCATGAT GATGCTGGTG ATGCTGCGCG TGATGCAGAT CCGCTGGACC
CGCACCTGGG CCGAAAAGGG CGGGCGGGCG CGCACCGCTT AA
 
Protein sequence
MGGTSFFLFG NPPCRHSAGK STYFHKNPSV NFFKAFLKSG HSPTLFAAFL YFSFSCCIWV 
LNGAMAPFIS ETFGLSPAQK GLMLSVPIIA GALMRFPLGL LSQYIGRKNA TLVEMGLIAV
AMLFGFFFVK SFNDLLAMGV LLGIAGASFG VALSLGSGSF PARHKGLAMG LVGAGNVGTA
VSVLIAPPLA QAFGWVTVYG IAAAAISIPM IVMIVFAKEP DDLDKHASFK QHIACLYEKD
GWAFSLIYAV TFGGFIGLAT FLPTYYYDQF SVSKVQAGQL TMLAAFMGAA LRVFGGWISD
RWGGINTLSV VLVTVAVTLT MCGMAGGSLV ATTLLVMLCF AALGAGNGAV FQLVPLRWPL
ATAVAGSMIG EIGALGGGLV PSAMGLSKQY GGSYAWGFFL FASLAMMMLV MLRVMQIRWT
RTWAEKGGRA RTA