Gene Pnap_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1409 
Symbol 
ID4689167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1495741 
End bp1496181 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content62% 
IMG OID639834411 
Productsignal-transduction protein 
Protein accessionYP_981644 
Protein GI121604315 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGG TTGCCGACAT TCTCAAATCC AAGGGCGGGG CCGCCGTTCA CACGATCAGG 
CCGGACGACT CGGTCTTCGA CGCCCTGAAG TGCATGGCCG ACAAGGGCAT TGGTGCCTTG
CTGGTGATGG AGGGCGATGC GATTGTCGGC ATCGTCACCG AGCGCGACTA TGCCCGCAAG
ATTGCGCTCA AGGGGCGCAC CTCGGCGCTG ACGCAGGTGC GCGATGTCAT GACCACCTCG
GTGATGTTTG TCCAGCCCAC GCAGACCAGC GAAGAGTGCA TGGCGCTGAT GACCGACAAC
CGGCTGCGCC ATTTGCCCGT GGTTCAGGAC AACCGGCTGG TTGGCCTGAT CTCCATCGGC
GATCTGGTCA AGGACATCAT CTCCGAGCAG AAGTTCGTCA TCGAGCAACT CGAACACTAC
ATCACCGGCC AGCGCGGCTG A
 
Protein sequence
MTAVADILKS KGGAAVHTIR PDDSVFDALK CMADKGIGAL LVMEGDAIVG IVTERDYARK 
IALKGRTSAL TQVRDVMTTS VMFVQPTQTS EECMALMTDN RLRHLPVVQD NRLVGLISIG
DLVKDIISEQ KFVIEQLEHY ITGQRG