| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1400 |
|---|
| Symbol | |
|---|
| ID | 4686450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1484455 |
|---|
| End bp | 1485702 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639834402 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981635 |
|---|
| Protein GI | 121604306 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.615162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.401096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAAT TTGATGTGGT GGTGATAGGC GCCGGCGCGG CCGGGCTGTT TTGCGCCGGC
CAGGCGGGCC GGCAGGGCCT GAAGGTCTTG CTCGTGGACC ACAGCGACAA GGTGGCCGAA
AAAATCCGCA TCTCGGGCGG CGGACGCTGC AATTTCACCA ACCGTGACGC CACGCCGGCC
CAGTTCCTGA GCGAGAACCC GCACTTTTGC CGCTCCGCCC TGTCGCGCTA CACGCCGCAG
GATTTCATCG AGTTGCTGCA GCGCCACGAC ATTCCCTTTC ATGAAAAGCA CAAGGGACAG
CTTTTTTGCG ACCGCTCCGC CGAAGACGTG ATCAACATGC TGCTCGCCGA ATGCGACGCC
GGCCAGGTCA CGCGCTGGCA GTCCTGCAGC ATCAAAACGG TGCTTTGCGC AGAGCAGGCG
GGCGCTACCA GCTACCAAAT CGAGAGCAGC CGGGGGCTGA TCGAAGCGCC CCAGGTGGTG
ATTGCCACCG GCGGCCTGTC GATTCCGAAA ATCGGCGCAA CCGATTTTGG CTACCGTATC
GCCAGGCAGT TCGGCCTGCG CCTGGTCGAG CCCAGGGCCG CGCTGGTACC GCTGACTTTT
GAGGGCGACA GTTGGGCGCC GTATGCCCAG CTGGCCGGCC TGGCGCTGCC GGTGAAAATC
GAAACCGGCC CGCCGGAGGC TACGCCCAAG CAGCGCAAAA AGGCCGTGGT ATTTTCCGAA
GACCTGCTGT TCACGCACCG GGGCCTGAGC GGCCCGGCGG TGCTGCAGAT TTCAAGCTTC
TGGCGCGAAG GCCAGCCGAT TCGCGTCAAC CTGGCGCCGG GCGTGGACCT GGCCGCCCTG
CTGCTGCGCG CTAAGGCAAC ATCCCGCAAA CTGATTGCCA ACGAGTTGGC CAGCCTGGTG
CCCAGCCGCC TGGCCGACGC CTGGGTCAGC GAAGACCCGG CCCTGCAGCG CCCGATCAGC
GACGCCACCG ACAAGGCCCT GCAGGCGCTG GCGCAGCGGC TGGGCGACTG GCAGCTCACG
CCCAACGGCT CGGAAGGCTA TAAAAAGGCC GAAGTCACGG TCGGCGGCGT CGATACCCGC
GACCTGTCAT CGCAAACCAT GGAGTCGAAA CAGCCGGGGC TGTATTTCAT CGGCGAAGTG
GTCGATGTGA CCGGCTGGCT CGGCGGCTAC AACTTCCAGT GGGCCTGGGC GTCCGGTTTT
GCCTGCGCGC AGGCGCTGGC GGCGCGGCGG GTTGAGCAGG TGGCGTAA
|
|---|
| Protein sequence | MHKFDVVVIG AGAAGLFCAG QAGRQGLKVL LVDHSDKVAE KIRISGGGRC NFTNRDATPA
QFLSENPHFC RSALSRYTPQ DFIELLQRHD IPFHEKHKGQ LFCDRSAEDV INMLLAECDA
GQVTRWQSCS IKTVLCAEQA GATSYQIESS RGLIEAPQVV IATGGLSIPK IGATDFGYRI
ARQFGLRLVE PRAALVPLTF EGDSWAPYAQ LAGLALPVKI ETGPPEATPK QRKKAVVFSE
DLLFTHRGLS GPAVLQISSF WREGQPIRVN LAPGVDLAAL LLRAKATSRK LIANELASLV
PSRLADAWVS EDPALQRPIS DATDKALQAL AQRLGDWQLT PNGSEGYKKA EVTVGGVDTR
DLSSQTMESK QPGLYFIGEV VDVTGWLGGY NFQWAWASGF ACAQALAARR VEQVA
|
|---|
| |