Gene Pnap_1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1391 
Symbol 
ID4686074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1476696 
End bp1477079 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content60% 
IMG OID639834393 
Producthypothetical protein 
Protein accessionYP_981626 
Protein GI121604297 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0149629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0177831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAGC CAGACCGCTA CCCCATTCGT CCCATCCGTA CCGACGCCGA TTACCGTGCC 
GCACTCGCAC TGGTGGCGCC TTATTTTGAC AACGAGCCCG AGATTGACAG TGATGCGGGC
GCGCATTTTG AGGCCATGCT GACCTTGATC GAAGCGTATG AGGCCAAGCA TTACCCCATC
AGCCCGCCTG ATCCGATAGA GGCGATTCTG TTTCGCATGG AGCAGCAGGG GCTCAAACCC
AAAGACCTGG AGCCCATGAT TGGGCAGCGC AACCGGGTGT ACGAGGTGTT GAACCGCAAG
CGAAAGCTGA CGCTGGCGAT GGTGTGGCGC CTGCATGTCG GACTGGGCAT TCCGGCGGAG
AGCTTGATTC GGCAGCCGGG GTGA
 
Protein sequence
MKKPDRYPIR PIRTDADYRA ALALVAPYFD NEPEIDSDAG AHFEAMLTLI EAYEAKHYPI 
SPPDPIEAIL FRMEQQGLKP KDLEPMIGQR NRVYEVLNRK RKLTLAMVWR LHVGLGIPAE
SLIRQPG