Gene Pnap_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1386 
Symbol 
ID4688095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1474535 
End bp1475341 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content58% 
IMG OID639834388 
Producthypothetical protein 
Protein accessionYP_981621 
Protein GI121604292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000107026 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0105588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTTTAA AACACACACT GGCTGCAGGC CTTGCCGCTC TTTGTCCACT TATTTGCCTG 
GCGCAAGCCG CTCCGGCGCC GGCCCAGGCG CTGTACCCAT GGCAAGTCGG GCCATCCCGG
AGCACGGCCG AAGCCTATTT CACCAACCTG CAGAACGGCG CGAAGATTGA AACGCCTTTT
CGCCTCGCGT TTGGGCTGAG CAGCGGCTGG GGTCTGGCCC CGATCAGTGC TCCGCAGGCC
GGAAAGAGCG GCCACCATCA TCTTTTGATC AACCGTGAGT TGCCCCTCGA CTTCAAGAAG
GCCTTGCCTT TTGATGACCA GTACATGCAC TTCGGCAAGG GGCAGATGGA AACGGTGCTG
ATGCTGGAGC CCGGCACCTA CACATTGCGC CTGCTGCTGG CGGATGACAA GCACCTGCCG
CATTTCGTTT ACAGCAAGCC GCTGAAGATC ACAGTCACGC GAAAAAACAA GGACATTGAT
CCGAAGAGCC TGATCAGCAA GGAAATCAGT TTTCCGAATA TCGCCCCTGA TGCCAGGCTC
AAGCCGCCGT TTACCGTGCA GTTTCAGGCT TCAGGACTCA ATGTGGCCCA TGTGAGCCAA
CAGCAAAAAG ACACAGGACA TTTCCGGCTG ACGGTGACCC CCAAAAACGG CGGCAAGCCG
GTAGAGATGG ATTTTCCGAA CGGCCAGACC GAAACCCGGC TGGCGCCGCC AGCGGGCGCC
TATGTCCTGA AGCTTGATTT CATGGACAAC ATGAATATGG GAAAAACGCT GGCTGACCCG
GTGTCCACGC CCGTGCGCGT GGAGTAA
 
Protein sequence
MALKHTLAAG LAALCPLICL AQAAPAPAQA LYPWQVGPSR STAEAYFTNL QNGAKIETPF 
RLAFGLSSGW GLAPISAPQA GKSGHHHLLI NRELPLDFKK ALPFDDQYMH FGKGQMETVL
MLEPGTYTLR LLLADDKHLP HFVYSKPLKI TVTRKNKDID PKSLISKEIS FPNIAPDARL
KPPFTVQFQA SGLNVAHVSQ QQKDTGHFRL TVTPKNGGKP VEMDFPNGQT ETRLAPPAGA
YVLKLDFMDN MNMGKTLADP VSTPVRVE