Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1386 |
Symbol | |
ID | 4688095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1474535 |
End bp | 1475341 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639834388 |
Product | hypothetical protein |
Protein accession | YP_981621 |
Protein GI | 121604292 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000107026 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0105588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTTTAA AACACACACT GGCTGCAGGC CTTGCCGCTC TTTGTCCACT TATTTGCCTG GCGCAAGCCG CTCCGGCGCC GGCCCAGGCG CTGTACCCAT GGCAAGTCGG GCCATCCCGG AGCACGGCCG AAGCCTATTT CACCAACCTG CAGAACGGCG CGAAGATTGA AACGCCTTTT CGCCTCGCGT TTGGGCTGAG CAGCGGCTGG GGTCTGGCCC CGATCAGTGC TCCGCAGGCC GGAAAGAGCG GCCACCATCA TCTTTTGATC AACCGTGAGT TGCCCCTCGA CTTCAAGAAG GCCTTGCCTT TTGATGACCA GTACATGCAC TTCGGCAAGG GGCAGATGGA AACGGTGCTG ATGCTGGAGC CCGGCACCTA CACATTGCGC CTGCTGCTGG CGGATGACAA GCACCTGCCG CATTTCGTTT ACAGCAAGCC GCTGAAGATC ACAGTCACGC GAAAAAACAA GGACATTGAT CCGAAGAGCC TGATCAGCAA GGAAATCAGT TTTCCGAATA TCGCCCCTGA TGCCAGGCTC AAGCCGCCGT TTACCGTGCA GTTTCAGGCT TCAGGACTCA ATGTGGCCCA TGTGAGCCAA CAGCAAAAAG ACACAGGACA TTTCCGGCTG ACGGTGACCC CCAAAAACGG CGGCAAGCCG GTAGAGATGG ATTTTCCGAA CGGCCAGACC GAAACCCGGC TGGCGCCGCC AGCGGGCGCC TATGTCCTGA AGCTTGATTT CATGGACAAC ATGAATATGG GAAAAACGCT GGCTGACCCG GTGTCCACGC CCGTGCGCGT GGAGTAA
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Protein sequence | MALKHTLAAG LAALCPLICL AQAAPAPAQA LYPWQVGPSR STAEAYFTNL QNGAKIETPF RLAFGLSSGW GLAPISAPQA GKSGHHHLLI NRELPLDFKK ALPFDDQYMH FGKGQMETVL MLEPGTYTLR LLLADDKHLP HFVYSKPLKI TVTRKNKDID PKSLISKEIS FPNIAPDARL KPPFTVQFQA SGLNVAHVSQ QQKDTGHFRL TVTPKNGGKP VEMDFPNGQT ETRLAPPAGA YVLKLDFMDN MNMGKTLADP VSTPVRVE
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