Gene Pnap_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1369 
Symbol 
ID4687443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1458145 
End bp1458600 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content67% 
IMG OID639834372 
Producthypothetical protein 
Protein accessionYP_981605 
Protein GI121604276 
COG category[I] Lipid transport and metabolism 
COG ID[COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000549037 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTGCCTGC TCGACCGCGT AACCAGTTGG GACACGGGCC AGATCAGCTG CGAGGCCACC 
AGCCACCTTT CGCCCGACAA TCCCTTGCGC TCGCACGGAC GGCTGGGCGC CGCATGCGGC
ATTGAATACG CCGCGCAGGC CATGGCCGTG CATGGCGCGC TGATCGCCGA AGCCAGCGCC
GGCGAGGCAC GGCATGGCCC GCAGATCGGC TACCTGGCCA GTGTGCGCAG CGTGATGCTG
CATGTCGAAA GGCTCGATGA CCTGGGCACA ACCCTCCTCA TCCGGGCCGA ACGCATGAGC
GGCGACGCCA GCACGATTCT TTACAGCTTC ACGGTTCACG GCGGGCCGGT GCTGCTGCTT
TCGGGGCGCG CCGTGGTCGT GCTCAATGCC GCTAACCTGG CGCTGCCGGG CCGCTCAAAC
CCGCCAGCCT TGCCACTTCC GGTTCACCCC TTATGA
 
Protein sequence
MCLLDRVTSW DTGQISCEAT SHLSPDNPLR SHGRLGAACG IEYAAQAMAV HGALIAEASA 
GEARHGPQIG YLASVRSVML HVERLDDLGT TLLIRAERMS GDASTILYSF TVHGGPVLLL
SGRAVVVLNA ANLALPGRSN PPALPLPVHP L