Gene Pnap_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1356 
Symbol 
ID4686218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1443279 
End bp1444112 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID639834359 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_981592 
Protein GI121604263 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0826661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATTG CACTGTTGAT CAAAGCCGCC ATCATGGGCA TTGTGGAGGG CTTGACCGAA 
TTTCTTCCAA TTTCATCGAC CGGCCATTTG ATCCTGGCCG GCGCGCTGCT GGGTTTTGAC
GACGACAAGG CCAAGGTGTT CGACATCGCC ATCCAGACCG GCGCCATTTT TGCGGTGATC
CTGGTGTACT GGCAAAAAAT TCGCAGCACC CTGATTGCAC TGCCGAATGA AAAACAGGCG
CAGCAGTTTG CGCTCAATGT GCTGGTGGCT TTTGTTCCGG CCGTGGTGCT GGGGCTGCTG
TTTGGCAAGG CCATCAAGGC GCACCTGTTC ACGCCGGTGG TCGTGGCCAG CGCCTTCATC
GTCGGCGGCT TCATCATCTT GTGGGCCGAA AAGCGCCAGC AGCGCAATCC GGCGACCATT
CGTATTCATG ATGTCGAGTC CATGAGCACG ATGGATGCGC TCAAGGTCGG CCTGGTGCAG
TGCCTGGCCA TGATCCCGGG CACCAGCCGC AGCGGCTCCA CCATCATTGG CGGCATGCTG
CTGGGCCTGT CGCGCAAGGC GGCGACCGAC TTTTCGTTTT ACCTGGCGAT TCCGACCCTG
ATTGGCGCTG GTGCCTACAG CTTGTTCAAG GACCGCGCGC TGCTGTCCAT GGCCGATGCG
CCGATGTTCG GTGTCGGGCT GCTGTTTTCA TTCCTGAGTG CCTGGCTGTG CATTCGCTGG
CTGCTGCGCT ACATCGCCAG CCATGACTTC GTGCCGTTTG CCTGGTACCG CATTGCCTTT
GGCATCGTGG TGCTGGCAAC CGCCTGGAGC GGCGTGGTCA CCTGGGCCGA ATAA
 
Protein sequence
MDIALLIKAA IMGIVEGLTE FLPISSTGHL ILAGALLGFD DDKAKVFDIA IQTGAIFAVI 
LVYWQKIRST LIALPNEKQA QQFALNVLVA FVPAVVLGLL FGKAIKAHLF TPVVVASAFI
VGGFIILWAE KRQQRNPATI RIHDVESMST MDALKVGLVQ CLAMIPGTSR SGSTIIGGML
LGLSRKAATD FSFYLAIPTL IGAGAYSLFK DRALLSMADA PMFGVGLLFS FLSAWLCIRW
LLRYIASHDF VPFAWYRIAF GIVVLATAWS GVVTWAE