Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1294 |
Symbol | |
ID | 4686881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1382867 |
End bp | 1384102 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639834297 |
Product | IS605 family transposase OrfB |
Protein accession | YP_981530 |
Protein GI | 121604201 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGGC TCCAGGCTTT CAAATACGAA CTCATGCCCA GCGGCGAACA AACACGCCAT ATGCGCCGCT TTGCCGGAGC GCGCCGCTTT GTGTTCAACA AGGCACTGGC ATTGCAGCAG GCCCATCACG CCAGTGGAGG CAAGTTCATC GGCTATTTTG CGATGGGCAA GCACCTGACC GCCTGGAAGC AGGAATCCCC CTGGCTCAAG GAATCGCCTT CCCAGGCCCT GCAGCAATCG CTCAAGGATC TGGACAAAGC CTGGAAAAAC TTCTTTGCCA AACGCGCCAG CTTTCCTCGT CCCAAAAAGA AAGGCCGTGG CGAAAGTTTT CGCTTCCCGC AAGGCTTCAA GATCGACCAG CCCAACAGCC GCATCTTCCT GCCCAAACTG GGATGGATGC GCTATCGCAA CAGCCGCGAC ATCCTGGGCA CGGTCAAAAA CATCACCATC AGCGAAGCAG GCGGTAAGTG GTTCGCCAGC ATCCAGACTG AGCGGGAGGT GGAACAACCG ATTCCAGTCG CAACGATGGC CATTGGCATT GATGTGGGCA TAGCGCGCTT CGCCACCATG AGCGACGGCA GCTTTGTTGC GCCGCTGTGC AGTTTCAAAA AGCATGAAAA ACGCTTGGCG AAATACCAGC GGCGCATGAG CCGCAAAACC AGATTCAGCA AAAACTGGCA CAAAGCCAAA AGAAAGGTTC AGAAAGTCCA CAGCCGGATA GCCAACGCCC GAAAAGACTT CCTGCACAAA ACGACAAGCG CCCTCAGCAA AAACTTTCGC GTGGTCGCCG TCGAAGATTT GCAGGTACGC AACATGAGCA AATCGGCAGC GGGCAATGCA GACAAGCCGG GCAAAAACGT AGCCGCGAAG TCGGGACTGA ACAAGTCCAT CCTCGATCAA GGCTGGTTTG AATTCCGGCG GCAGCTGCAA TACAAGCTCG ATTGGAACGG CGGCATTCTC ATTGCCGTGC CGCCCCAGTA CACCAGCCAG ACCTGTCCGT GCTGCGGGCA TGTCGCCAAA GAAAACCGAA AAACGCAAGC GAAGTTTGAA TGCGTCGATT GCGGCTACGA GAACCACGCC GATGTCGTCG GCGCGATGAA TATATTGGCG CGGGGATACC GCGCAGCAGC CTGTGGAGAG GACGGCTCTG GCCTTGCGCG CAAGCGCAAG ACGAAACCAG CCTCGGTGAA GCAGGAACCC GCCGAAGCGG CTATGCAAGA GGCAACTCAT GTTTAG
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Protein sequence | MKRLQAFKYE LMPSGEQTRH MRRFAGARRF VFNKALALQQ AHHASGGKFI GYFAMGKHLT AWKQESPWLK ESPSQALQQS LKDLDKAWKN FFAKRASFPR PKKKGRGESF RFPQGFKIDQ PNSRIFLPKL GWMRYRNSRD ILGTVKNITI SEAGGKWFAS IQTEREVEQP IPVATMAIGI DVGIARFATM SDGSFVAPLC SFKKHEKRLA KYQRRMSRKT RFSKNWHKAK RKVQKVHSRI ANARKDFLHK TTSALSKNFR VVAVEDLQVR NMSKSAAGNA DKPGKNVAAK SGLNKSILDQ GWFEFRRQLQ YKLDWNGGIL IAVPPQYTSQ TCPCCGHVAK ENRKTQAKFE CVDCGYENHA DVVGAMNILA RGYRAAACGE DGSGLARKRK TKPASVKQEP AEAAMQEATH V
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