| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1278 |
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| Symbol | |
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| ID | 4687179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1367641 |
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| End bp | 1368882 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639834281 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_981514 |
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| Protein GI | 121604185 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.716474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TGCAAGCCTT CAAATTCGAA CTCATGCCTG ACGGCGGGCA GCAGCAGGGC
ATGCGCCGCT TCGCCGGGGC GCGCAGGTTT GTCTATAACC GGGCTTTGGA TATTCAAAAG
GCCAACTACG CAGCAGGCGG CAAATTTATC GGCTATGTGG ATATGGCAAA CCGCCTTCCA
GAGTGGAAAA GAGCGTTCGA ATGGCTCAAG GAGTCGCCAT TTCACACCTT GCAGCAGTCG
CTTAAAGATG CCGAGCGGGC CTTCAAGAAC TTCTTTGAAA AACGCGCAGG ATTTCCGCGC
TTCAAGAAAA AAGGCAGCGG CGAGAGTTTT CGTTTTCCTG ACGCCAAACA GTTCGCAATC
GACCAGGCCA ACAGCCGCAT CAAGCTGCCC AAACTGGGAT GGATGCGCTT TCGCAATAGC
CGGGATATTG TGGGCACGGC CAAGAACATC ACCATCAGCC AAGCAGGCGG CAAGTGGTTT
GCCAGCATCC AGACTGAACG AGAGCTGGAA CAACCCGTAC CCATAGCCAC CAGCGCCATC
GGCATTGATG TGGGAATAGC CCGTTTTGCG ACCCTGAGCG ATGGCAGTTT TGTTGCGCCG
CTGTGCAGTT TCAAAAAGCA TGAGAAACGC CTGGCCAAAT ACCAGCGGCG CATGAGCCGC
AAAACCAGGT TCAGCAAGAA CTGGCACAAA GCCAAAAGGA ACATTCAAAA AGTCCACACA
ACAATAGCCA ACGCCCGAAA AGACTTCCTG CACAAGACGA CAAGCGACCT CAGTAAAAAC
CACGCGATGG TCGCCGTCGA AGATTTGCAG GTACGCAACA TGAGCCGGTC GGCTGCGGGC
AATGCGGAAA AACCGGGCAA GAACGTCGCC GCCAAGTCCG GACTGAACAA AGCCATCCTC
GACCAAGGCT GGTTCGAGTT CCGACGGCAG CTGGAGTACA AGCTCGCTTG GCGCGGCGGC
ATTCTCATTG CCGTTCCAGC GCACCACACC AGCCAGACCT GCCCATGCTG CGGGCATGTC
GCCAAAGCAA ACCGCCAAAC GCAAGCGAAG TTTGAATGCG TCGATTGTGG CTACCAGAAC
CACGCCGATG TCGTCGGCGC GATGAACATA TTGGCGCGGG GATACCGCGC AGCAGCCTGT
GGAGAGGACG GCTCTGGCCT TGCGCGCAAG CGCAGGGCGA AACCAGCCTC GGTGAAGCAG
GAACCCACTG AAGTGACCAT GCAAGAGCCC GCTCATGCGT AG
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| Protein sequence | MKRLQAFKFE LMPDGGQQQG MRRFAGARRF VYNRALDIQK ANYAAGGKFI GYVDMANRLP
EWKRAFEWLK ESPFHTLQQS LKDAERAFKN FFEKRAGFPR FKKKGSGESF RFPDAKQFAI
DQANSRIKLP KLGWMRFRNS RDIVGTAKNI TISQAGGKWF ASIQTERELE QPVPIATSAI
GIDVGIARFA TLSDGSFVAP LCSFKKHEKR LAKYQRRMSR KTRFSKNWHK AKRNIQKVHT
TIANARKDFL HKTTSDLSKN HAMVAVEDLQ VRNMSRSAAG NAEKPGKNVA AKSGLNKAIL
DQGWFEFRRQ LEYKLAWRGG ILIAVPAHHT SQTCPCCGHV AKANRQTQAK FECVDCGYQN
HADVVGAMNI LARGYRAAAC GEDGSGLARK RRAKPASVKQ EPTEVTMQEP AHA
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