| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1258 |
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| Symbol | |
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| ID | 4687593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1350838 |
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| End bp | 1353174 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834261 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_981494 |
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| Protein GI | 121604165 |
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| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
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| COG ID | [COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.123345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGA AAATGCATCA GCATCACAAT GCCAGCCCTC CAGCCAAGCC ATCCTCGCCA
ACCGATCTCA AGGATCCGGT GTGCGGCATG ACCGTCACGC AGCAGTCTGC CCACAAGTTG
ACGCACGAAG GCCGGCCCTA CTATTTCTGC AGCGCCAAGT GCCAGGGCAA ATTCGCGGCG
AACCCGCTGC AATACCTCGC GCCCACGCCA GTGGTGAATG CGCCCCCAGC GGCGGCCGGC
ACGATCTACA CCTGCCCGAT GCACCCCGAG ATCCGCCAGG ACCATCCGGG CAACTGCCCC
AAGTGCGGCA TGACGCTGGA GCCGCTGCTG CCTGAGCTTG GCGACGATGA AAACCCGGAG
TTACGCGACT TTCAGCGCCG GTTCTGGTGG ACCTTGCCGC TGACGGCCAT TGTCTTTGTG
CTCGCCATGC TGGGCCACCG TTTGCAGTGG ATGGACATGG CCGTGCAGAG CTGGGTCGAA
CTGGCGCTGT CGATTCCCAT CGTCCTGTGG GCCGGCTGGC CGTTCTTCTC GCGCGGCTGG
CAATCCGTGG TGAACCGAAG CCCCAACATG TGGACCTTGA TTGGTATTGG CACCGGCGCG
GCCTTTGTCT ATAGCGTGGT GGCAACCATC GCGCCGCAGG TTTTCCCCGA TTCGTTCATC
TCCATGGGCC GCGTCGCCGT GTACTTTGAA GCGGCCGCCG TCATCATCTC GCTCACGCTG
CTGGGCCAGG TGCTCGAACT CAAGGCCCGC TCCCAGACCT CGGCGGCGAT CAAGTCGCTG
CTGGGCCTGG CGCCCAAGAC GGCGCGCCGC ATCCGGGAGG ACGGCACCGA GGAAGACGTG
CCGCTGACGC ATGTGCATGT GGGCGATGTG CTGCGCGTGC GCCCGGGCGA GAAGGTGCCG
GTCGATGGCG TGGTGCTTGA GGGCGGCAGC GCGGTCGATG AATCCATGCT CACGGGCGAG
CCGATGCCGG TGGCCAAGCA CGCGGGCGAC AAGGTGATAG GCGCCACGCT CAACACCAGC
GGCGCGCTGG TCATGCGTTC GGAGCGCGTC GGCGCGGCCA CCATGCTGTC GCAGATCGTG
CAGATGGTCG CCCAGGCCCA GCGCTCCCGG GCGCCGATGC AGCGCATGGC CGACGTGGTG
GCGGGCTACT TCGTCGTCAC GGTGGTGGGC ATTGCCGTGC TGACCTTCTT CGGCTGGGGC
CTGTTCGGTC CCGAGCCGCG CTGGGTGTTC GGCCTGATCA ATGCGGTGTC GGTGCTGATC
ATTGCCTGCC CCTGCGCGCT GGGCCTGGCC ACGCCGATGT CCATCATGGT CGCCACCGGA
CGCGGCGCGA CGCACGGCGT GCTGTTCCGC GATGCGGCGG CCATCGAGAA CCTGCGCAAG
ATCGACACCC TCATCATCGA CAAGACCGGC ACACTGACCG AAGGCCGCCC GACGTTTGAG
CGCGCCATTC CCGCGCCCGG CTGTGACGCC GACGAGGTGC TGCGCCTGGC CGCCAGCCTG
GACCAGGGCA GCGAGCATCC GCTGGCCGAA ACCATCGTGC GCGCCGCCCG CGAGCGCGGC
ATGCTGCTGG ACAAGCCCGA GAACTTTGAA TCCGCCTCGG GCATCGGCGT GCGCGGAACC
GTGGCGGGGC GCCGGCTGGC GCTGGGCAAC ACCACGCTGA TGGAGCAGAT CGGTGTTTCG
GTCGCGACCC TGGAGCCGCA GGCCGAAGCC TTGCGCGCGG AAGGCGCCAG CGTGATGCAT
CTGGCGGCCG ATGGCCAGCT GATGGGCCTG CTGGCCGTGT CCGACCCCAT CAAGGCCAGC
ACGCCCGAGG CGCTGGCAAC CCTGAAAGCG GCCGGGCTGC GCATCGTCAT GGCGACTGGC
GACGGCTTGA GCACGGCAAA AGCCGTTGCA GCCCGCTTGG GGCTTGACGA AGTCCATGGC
GAGGTCAAGC CGGCCGACAA GCTGCTGCTG GTGGAAAAGC TGCAACAGGA AGGCCGTGTG
GTGGCGATGG CCGGCGATGG CATCAACGAC GCGCCAGCGC TGGCCCGGGC TGATGTTGGC
GTGGCCATGG GCACCGGCAC CGACGTGGCG ATGAACAGCG CGCAGGTCAC GCTGGTCAAG
GGCGATCTGC GCGGCATCGC GATTGCACGC GCCTTGTCCG AAGCGACCGT GGGCAACATG
AAGCAGAACC TGGTGTTCGC CTTTTTGTAC AACGCGCTGG GCATCCCGAT TGCCGCCGGC
GTGCTCTACC CGCTGACGGG CTGGCTGCTG TCGCCGTTGA TCGCGGCGCT GGCCATGAGC
TTCAGCTCGG CCTCGGTGAT CGGCAACGCC CTGCGGCTGC GAAACAGACG CGTCTAG
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| Protein sequence | MDMKMHQHHN ASPPAKPSSP TDLKDPVCGM TVTQQSAHKL THEGRPYYFC SAKCQGKFAA
NPLQYLAPTP VVNAPPAAAG TIYTCPMHPE IRQDHPGNCP KCGMTLEPLL PELGDDENPE
LRDFQRRFWW TLPLTAIVFV LAMLGHRLQW MDMAVQSWVE LALSIPIVLW AGWPFFSRGW
QSVVNRSPNM WTLIGIGTGA AFVYSVVATI APQVFPDSFI SMGRVAVYFE AAAVIISLTL
LGQVLELKAR SQTSAAIKSL LGLAPKTARR IREDGTEEDV PLTHVHVGDV LRVRPGEKVP
VDGVVLEGGS AVDESMLTGE PMPVAKHAGD KVIGATLNTS GALVMRSERV GAATMLSQIV
QMVAQAQRSR APMQRMADVV AGYFVVTVVG IAVLTFFGWG LFGPEPRWVF GLINAVSVLI
IACPCALGLA TPMSIMVATG RGATHGVLFR DAAAIENLRK IDTLIIDKTG TLTEGRPTFE
RAIPAPGCDA DEVLRLAASL DQGSEHPLAE TIVRAARERG MLLDKPENFE SASGIGVRGT
VAGRRLALGN TTLMEQIGVS VATLEPQAEA LRAEGASVMH LAADGQLMGL LAVSDPIKAS
TPEALATLKA AGLRIVMATG DGLSTAKAVA ARLGLDEVHG EVKPADKLLL VEKLQQEGRV
VAMAGDGIND APALARADVG VAMGTGTDVA MNSAQVTLVK GDLRGIAIAR ALSEATVGNM
KQNLVFAFLY NALGIPIAAG VLYPLTGWLL SPLIAALAMS FSSASVIGNA LRLRNRRV
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