| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1244 |
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| Symbol | |
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| ID | 4687598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1334837 |
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| End bp | 1336552 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834247 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_981480 |
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| Protein GI | 121604151 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG AAGAATTGAA TCTGGCCCCG GCCATTTTGA AGGCCGTGCT TGAGCAGGGC
TACGATACCC CCACGCCGAT CCAGGCACAG GCTATTCCCG CCGTGCTTGC TGGCGGTGAT
TTGCTGGGCG GCGCCCAGAC CGGCACCGGC AAGACGGCGG CGTTCACGCT GCCGCTGCTG
CAGCGCCTCT CGACCGAACC GCGCCTGACC AACCGGCGCG GCGTCAACGC GGTTCGCGCC
CTCATCATGA CCCCGACGCG CGAACTCGCC GCGCAGGTCG AGGAAAGCGT TCGCACCTAC
GGCAAATACC TGGACCTCAC CTCGATGGTA ATGTTCGGCG GTGTCGGCAT GGGCGCGCAA
ATCGAAAAAC TGCGCCGTGG CGTGGACATC CTGGTGGCCA CCCCCGGCCG CCTGCTGGAC
CATGCCAGCC AAGGAACGCT GGACCTGAGC CAGGTGCAGA TCCTGATCCT CGACGAAGCC
GACCGCATGC TGGACATGGG CTTCATCCAT GACATCAAGA AAGTGCTGGC ACTGGTGCCC
AAGCAGAAGC AGACGCTGCT GTTTTCCGCC ACCTTCAGCG ATGAAATCCG CGAACTGGCC
AATGGCCTGC TGCGCAACCC GCTGTCCATC CAGGTCACGC CGCGCAACAC CACGGTGCAG
CGCATCACGC AGACCATCCA CCCGGTCGGC CGCAGCAAGA AGAAAGCCCT GCTGACGCAC
ATCATCAACG AACACAACTG GAGCCAGGTG CTGGTGTTCA CGCGCACCAA GTTCGGCGCC
AACAATGTGG CCGAGCATCT GACCAAGGCC GGCATTCCCG CCATGGCGCT GCACGGCAAC
AAGAGCCAGA CGGCCCGCAC GCAAGCCCTG CAGGGCTTCA AGAACGGCGA CATCCGCGCG
CTGGTGGCAA CCGACATTGC CGCGCGCGGC ATTGACATCG ACGAGTTGCC ACACGTCGTC
AACTACGAAA TCCCGAACGT CAGCGAAGAC TATGTCCACC GCATCGGCCG CACCGGCCGC
GCCGGCAACA GCGGCCAGGC CGTCAGCCTG GTGTGCCTGG ACGAAGAAGG CTTCATGCAG
GACATCGAGC GCTTCACCAA GCAGAACATC GAAAACATCG TCGTTCCCGG CTTCGAAGCC
GAACCCGGCG AAAAAGCCGA GCCGCTGGCC ATGGGCCGCC AGACCATCTG GGGCGGCCTG
GGCAAGCCGC CAAGCCGCGA CGTGATGCAG GCCGCCGCCA AGGCAGCCCG GTCCGAAATG
ATGACCCGCA TCCGCGACAC CAAGGGCGCC CAGCCTGCGC GTGGCGGCAA TGCCGGCGCG
GGTGGACGCG GTGGCCGCGC CCCTGCCGGC AACAGCGCAG GCGCTGGCCG TGGCGGCAAT
GGCGGTGGCG GCTTCGCCGG CAACGGTGGC GGCAATGCCG ACCGCCGTGG ACCGGCACCG
CGCCAGAATG CCAGCTACCC ACAAGGCGGC CAGCCCGCTT TCAGCCAGCC ACGAAGCGCG
CATGCCCCGG CGCCGCGCCA GCGCGACAGC GAGTCCCGCA ATGACTTCGA CAGCCAGCAG
CCGGCCAGCC ACGCGTCGTC CGGATTCCCG TCGTCAGGCC AGCCCACAGG CAACCGCAAC
AACTTCCGTG GCGGCCCCCG CACCGGCGGC GGCGCGGGTG ACCGAAGCAA CGGACCTCGC
CGTTCAGGCG GCCCGGGCTC GTTCACCGGC CGATAA
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| Protein sequence | MKFEELNLAP AILKAVLEQG YDTPTPIQAQ AIPAVLAGGD LLGGAQTGTG KTAAFTLPLL
QRLSTEPRLT NRRGVNAVRA LIMTPTRELA AQVEESVRTY GKYLDLTSMV MFGGVGMGAQ
IEKLRRGVDI LVATPGRLLD HASQGTLDLS QVQILILDEA DRMLDMGFIH DIKKVLALVP
KQKQTLLFSA TFSDEIRELA NGLLRNPLSI QVTPRNTTVQ RITQTIHPVG RSKKKALLTH
IINEHNWSQV LVFTRTKFGA NNVAEHLTKA GIPAMALHGN KSQTARTQAL QGFKNGDIRA
LVATDIAARG IDIDELPHVV NYEIPNVSED YVHRIGRTGR AGNSGQAVSL VCLDEEGFMQ
DIERFTKQNI ENIVVPGFEA EPGEKAEPLA MGRQTIWGGL GKPPSRDVMQ AAAKAARSEM
MTRIRDTKGA QPARGGNAGA GGRGGRAPAG NSAGAGRGGN GGGGFAGNGG GNADRRGPAP
RQNASYPQGG QPAFSQPRSA HAPAPRQRDS ESRNDFDSQQ PASHASSGFP SSGQPTGNRN
NFRGGPRTGG GAGDRSNGPR RSGGPGSFTG R
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