| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1222 |
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| Symbol | |
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| ID | 4689020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1311524 |
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| End bp | 1312879 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834225 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_981458 |
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| Protein GI | 121604129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.110808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.111103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGG CGGCTTCCGC ACCCCGGCTG GAGGGCCTGG ACGGCTGGCT GACGGCACTG
ACCCAGCCCA GCGCATTGAC CGAACTGGCC GCGCTGCTGG CCTGCGTGCT GCTGGCCTGG
CTGCTGGCGC GGGCACTGAG CCGCACGCAG CATCTGAAAA ACGACGCGTC GATTCTTTTT
GGCCGGCGCC TGGTCGATGG CGTGCTGTTT CCGCTGCTGC TGCTGTCGCT GGCCTACGTC
ATGCAGACGC TGCTGGCGCG GCTGTTTCCG CTGGCGCTGT TCAAGGTGGC CATCCCGGTG
CTGCTGGCGC TGGCCGTGAT TCGCCTGAGC GTCAAGGTGC TGCAGGTGGC TTTCAAGGAC
GCGCCGGTGG TGCGTGTGCT GGAGCGGACT GTTTCCTGGC TGGCCTGGGC GCTGATGGTG
CTCTGGATCA GCGGCCTGCT GCCCATCATC CTTGATGAGC TGGACAGCAT CAAGTGGAAG
GTCGGCGGCT CGATGCTGTC GGTGCGCGCC CTGCTGCAGG GTGCGCTGAC AGCCGGCGTC
GTGCTGTTGA TCACCTTGTG GATCTCGGCG GCGATTGAAA GCCGGCTGCT GCGCGCGGCC
ACCGGCAGCG AGCTGTCCCT GCGCAAGGCC GTGAGCAATG CCAGCCGGGC CGGGCTGATG
TTCGTGGGGC TGCTGCTGGC GCTGTCGTCC GTGGGCATCG ACCTGACGGC GCTGTCGGTG
CTGGGCGGCG CGATTGGCGT GGGCGTGGGT TTTGGCCTGC AAAAGCTGGC CTCCAACTAT
GTGAGCGGTT TTGTCATGCT GGCCGAACGC AGCGTGCGCA TCGGCGACAA CATACGCGTC
GATACCTTTG AAGGCCGCAT CACCGACATC AAGGCCAGGT ACACCGTGGT GCGCGCGCCG
TCCGGGCGCG AATCCATCGT GCCGAACGAA ATGTTCATCA TCAACCGCAT TGAAAACCTG
TCGCTTACCG ATACGCGGGT GCTGCAGTCC ACCGTGGTGT CGGTGGGCTA TGACAGCGAT
GTGGCGCAGG TGATGGAGCT GCTGATTGAG GCGGCTGCGG GCCGCGAGCG CGTGCTGGCC
GACCCGAAGC CGGGCGCCAA CCTGACGAAC TTTGGCGCGG ACGGGCTGGA ATTCACGCTC
AATTACTGGA TTTGCGACCC TGAAAACGGC CAGCAGAATG TGCGCTCGCA GATCAACCTG
GCGATCCTGA AATCATTGCG CGAGCACCAC ATCGATATTC CGTATCCGCA GCGGGTCATC
CACACCCGCG CCAGTCCGGC CGCAGAGGAC AATCCCGATA CGCCAGCGCG CACCGCCACC
CCCGGGCCGG TCACGCTGGC GCCCACAGAA AAATAG
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| Protein sequence | MNPAASAPRL EGLDGWLTAL TQPSALTELA ALLACVLLAW LLARALSRTQ HLKNDASILF
GRRLVDGVLF PLLLLSLAYV MQTLLARLFP LALFKVAIPV LLALAVIRLS VKVLQVAFKD
APVVRVLERT VSWLAWALMV LWISGLLPII LDELDSIKWK VGGSMLSVRA LLQGALTAGV
VLLITLWISA AIESRLLRAA TGSELSLRKA VSNASRAGLM FVGLLLALSS VGIDLTALSV
LGGAIGVGVG FGLQKLASNY VSGFVMLAER SVRIGDNIRV DTFEGRITDI KARYTVVRAP
SGRESIVPNE MFIINRIENL SLTDTRVLQS TVVSVGYDSD VAQVMELLIE AAAGRERVLA
DPKPGANLTN FGADGLEFTL NYWICDPENG QQNVRSQINL AILKSLREHH IDIPYPQRVI
HTRASPAAED NPDTPARTAT PGPVTLAPTE K
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