| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1216 |
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| Symbol | |
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| ID | 4688965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1304545 |
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| End bp | 1305636 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834219 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_981452 |
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| Protein GI | 121604123 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.151097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTTC ACACCGCTTC CTTTCACTTC AAGCTTGCTC TGTTTTTAAT AGCTGTCAGT
GCAGGCGCAG CAAGCGCAAA GGACGTAAAA TCCTTAAAAA CCAAGGTTTC CGCCAGGGCC
GAGCAGGCGC AGGGGCCGCT GTACGCCACG CGCGCCGACG CCATGCAGTT TGCCGACGAC
CTGGCCAGCC GCCGCAGCCT TGACCCCGAG TGGGTGCGCC AGGCCATCGG CCAGTCGCGC
TTCAACCCCA CGGTGGCGCG GCTGATGCAG CCGCCCACAA AGGCTTTCGT CAAGAACTGG
CGCGTCTATC GCAGCCGCTT CATCGACCCG GTCCGCATCC AGGCCGGCGT GAACTTCTGG
CAGGCCAACC GCAGCACGCT GGCGCGCGCT GAAAAGGAAT ACGGCGTTCC CCCCGAGATC
ATCGTCGGCA TCATCGGTGT CGAAACCATC TACGGCCGCG ACACCGGCAG CTTCCGGGTG
ATGGATTCGC TGGCCACGCT GGCCTTCGAC TTTCCGTCCA GCCACCCGCG CGCCCAGGAA
CGCAGCGACT ACTTCAAGGG CGAGATCGAG CAGTTCCTGA CCATGGAAAG CCGAAGGAAC
GCCGACCCGT TCGAGCCACG CGGCAGCTAC GCCGGCGCCA TGGGCATGCC GCAGTTCATG
CCGTCGAGCC AGGCCAAGCA TGCGGTGGAC TTCGACGGCG ACGGCAACAT CGACCTGTGG
AACAGCCCGG CCGACGTGAT CGGCTCGGTC GCCAGCTATT TCAAGGCCTA CGGCTGGCAA
AGCGGCATGC CGACGCACTA CCCGGTGCGC TTCGACGCCA GCCGGCTGGA CATGGACGCG
CTGATGGCGC CCGACATTTT GCCGACCTTC GGCGTCGCCA GCTTCACCGC CAAGGGCGCG
GTGCTCGAAG GCCCGGCCTT GGAGCACAAG GGTCCGCTGG CGCTGGTCGA ACTGCTCAAC
GGCCCGGACG CGCCCAGCTA CGTGGCCGGC ACCGAGAACT TCTATGTCAT CACGCGTTAC
AACTGGAGCA GTTACTACGC GATGGCGGTG ATTGAATTGG GGCGGGAAGT AGCCGGGCGA
CTCGCGCCGT GA
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| Protein sequence | MTLHTASFHF KLALFLIAVS AGAASAKDVK SLKTKVSARA EQAQGPLYAT RADAMQFADD
LASRRSLDPE WVRQAIGQSR FNPTVARLMQ PPTKAFVKNW RVYRSRFIDP VRIQAGVNFW
QANRSTLARA EKEYGVPPEI IVGIIGVETI YGRDTGSFRV MDSLATLAFD FPSSHPRAQE
RSDYFKGEIE QFLTMESRRN ADPFEPRGSY AGAMGMPQFM PSSQAKHAVD FDGDGNIDLW
NSPADVIGSV ASYFKAYGWQ SGMPTHYPVR FDASRLDMDA LMAPDILPTF GVASFTAKGA
VLEGPALEHK GPLALVELLN GPDAPSYVAG TENFYVITRY NWSSYYAMAV IELGREVAGR
LAP
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