| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1168 |
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| Symbol | |
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| ID | 4690101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1244869 |
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| End bp | 1246719 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834172 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_981405 |
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| Protein GI | 121604076 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.549582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGA TTTCGACACA GCTTTCAGCG CTTCGCACCC TGCCAGAACT GCTGGCCTTT
CGCGTGGCGC AGAGTCCGCA GGGCGAGGCC TACCGCGAAT TTGATGCGGC CACCGGCCAG
TGGAAGGCTA CCCGCTGGGC TGAGGCCGGT GGGCGCATCG CGCAATGGAG CCAGGCCCTG
GCGGCCATGC AGCTGCCCCG GCAGGCGCGC ATTGCTGTTC TGCTGCCCAA TGGCCTGGAT
GCGGTGTGCA TCGACCAGGC GGCGCTGTCG CGGGGCCTGG TGCCGGTGCC GCTGCATGCC
ATCGACAACC CCGGCAGCAT TGCCTACATC CTGTCGGACT GCGACGCTTG TGTGCTGATG
GTGCCGTCGC TGGCGCAGTG GCGCGCGATA GAAAGTGTGG GCCTTGCGCT GCCGGCGCTC
AGGCAGGTGG TGGTGACTGC ACGCGAGGCC CTGCCCGCTG GCATCGGGCC GGTGTCCGTC
ATCTTGCTGG CCGACTGGCT GGCGGCGGGG CAGGGCACGG CGCATGCCGC GCAGCCGCCG
GCCGAAGACG AACTGTCCGC CATCGTCTAT ACCTCGGGCA CCACCGGCAA GCCCAAGGGC
GTGATGCTGA CGCACCGCAA CGTGGTGTCC AACGTGCTGG CCATCCTGGA GCGCGTGGTG
CCGACGGCGG GCGACGTGTT CTTGTCCTTT TTGCCGCTGT CGCACACCTT TGAGCGCACG
GCCGGCTACT ACCTGCCGCT GGCGGTGGGC AGCTGCGTGG CCTATGCGCG CTCGGTGGCC
TTGCTGGCCG AAGACCTCAA GACCGTGCGC CCGACTGTGC TGGTGTCGGT GCCGCGCATC
TACGAGCGGG TGTTTGCCAG GCTGCACGAG TCGCTGGCCG GCTCGGCCTT CAGGACGCGT
CTGTTCAATG CCGCGCAGGC CGTGGGCTGG CGGCGCTTTT GCAAGGTGCA GGGCTTGCCG
CTGGCCGCCG GCGAAGGCAG CGCCTGGGCG ATGCTGGACC CGCTGCTGTG GCCGTTTCTG
GATCGGCTGG TCGCGCGCAA GCTGCGGGCG CAGTTCGGCG GGCGGGTGCG CGTGGCCGTG
AGCGGCGGCG CGCCGCTGTC GCATGCGGTG GCACGCTGCT TTCTGGGGCT GGGCGTGCCG
CTGCTGCAGG GCTACGGCAT GACCGAGACC TCGCCGGTGG TGGCGGCCAA CGGCGTCGAT
GACAACGACC CGGCCACCGT GGGCCGCGCG CTGCCCGGCA TCGAGGTGCG TATCGGCGAC
AACCGCGAGC TGCAGGTGCG CGGCCCGTCG GTGATGAAAG GCTACTGGAA GCGCGCCGAG
GACACGGCGC GCGTGTTGAC GCCGGACGGC TGGCTGTCCA CCGGCGACCA GGCCGATATT
CAGGACGGCC GCATCCGCAT CATGGGCCGG ATCAAGGAAA TCATCGTCAC CTCGACCGGC
GAAAAGGTGC CGCCCGGCGA TCTGGAACTG GCGATTGCGG TCGATCCGCT GTTCGCGCAG
GTGATGGTGG TGGGAGAGAA CCGGCCCTTC ATTGGCTGCG TGGCGGTGGT CAACAAGGCC
GAATGGCAGC GCCTGGCCGC GTCCCTGGGG CTGGACCCTA TCGCTGCCGC CAGCTTGAGT
CAGCCGGCGG TTCGCAAAGC CGCCTTGGCG CGCATTGCCA TCCAGACCCG CGACTTTGCC
CGCTATGCTG CGCCGCGCGC CATTTTCCTG ACGCTGGAGC CCTGGACGAT TGAAAACACC
TTCATGACGC CGACGCTCAA GCTCAAGCGC AACAACCTGA TGGCCCGCTA TGCCGATGAG
ATCGATGCGA TGTACCGTTC GCCAGACCGC AACGGCACGC CAGCCGGATA A
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| Protein sequence | MNTISTQLSA LRTLPELLAF RVAQSPQGEA YREFDAATGQ WKATRWAEAG GRIAQWSQAL
AAMQLPRQAR IAVLLPNGLD AVCIDQAALS RGLVPVPLHA IDNPGSIAYI LSDCDACVLM
VPSLAQWRAI ESVGLALPAL RQVVVTAREA LPAGIGPVSV ILLADWLAAG QGTAHAAQPP
AEDELSAIVY TSGTTGKPKG VMLTHRNVVS NVLAILERVV PTAGDVFLSF LPLSHTFERT
AGYYLPLAVG SCVAYARSVA LLAEDLKTVR PTVLVSVPRI YERVFARLHE SLAGSAFRTR
LFNAAQAVGW RRFCKVQGLP LAAGEGSAWA MLDPLLWPFL DRLVARKLRA QFGGRVRVAV
SGGAPLSHAV ARCFLGLGVP LLQGYGMTET SPVVAANGVD DNDPATVGRA LPGIEVRIGD
NRELQVRGPS VMKGYWKRAE DTARVLTPDG WLSTGDQADI QDGRIRIMGR IKEIIVTSTG
EKVPPGDLEL AIAVDPLFAQ VMVVGENRPF IGCVAVVNKA EWQRLAASLG LDPIAAASLS
QPAVRKAALA RIAIQTRDFA RYAAPRAIFL TLEPWTIENT FMTPTLKLKR NNLMARYADE
IDAMYRSPDR NGTPAG
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