Gene Pnap_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1156 
Symbol 
ID4689492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1226937 
End bp1227821 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID639834160 
Producthypothetical protein 
Protein accessionYP_981393 
Protein GI121604064 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.40892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACT GGCCCATCCT TTCCACCCTG CTGTTGACAT TCGCGATTCT GGCCGGCTGC 
GCCACGCTCG ATGAACAGCA GCGCGGCTGG ATCTTCCAGC CCAGCGACCG CAGCTGGGGC
GGCAGCGCCG AACTGGCGCG GGACATGCAG AATGTCTGGA TCGGCTTTGA TTCGACAACC
ACCGGCCGCC CGGTGAAACT GCACGGGCTG TGGCTGCCGG CCGACAAGCA GCAAACCGGC
TGGAACGGCG CCAAGGCCCC GCTGCTGCTG TACCTGCACG GCGCGCGCTG GAATGTCGAG
GGTTCGGCGC CGCGCATCCG CCGCATGCAG GAACTCGGGT TTTCGGTGCT GGCCGTCGAT
TACCGGGGCT TTGGCAAAAG CTCGCCCGAC CTGCCGTCTG AAAACATGGC CTACGAAGAC
GCGCAGGCCG CTTGGCGCTG GCTGGCCGCG CATCATCCGG GCCAGCCGCG CTACATCTTC
GGCCATTCGC TGGGCGGCGC GGTGGCCATC GAGCTGGCCT CGCGCGTCCA TGACGAGGCG
GGCACGATTG TCGAGGGCAC GTTCACCTCC ATCGCCGATG TGGTCAGCAC CATGAAATGG
GGCTGGCTGC CGCTGAGCGC GCTGATCACC CAGCCTTTCG AGTCGGTGCA AAAAGTGGCC
CGCCTGGGCT CGCCGCTGCT GGTCGTGCAT GGCACGAAAG ACACCATGAT CCTGCCGTCA
CTGGGCCGCA AGCTGTATGA AGCGGCGCAG CAGCCCAAGG CCTTCGTGCT GGTCGAGGGC
GGCTCGCACT TCAACACCAA CACGCTCGGG CAGGCGCAAT ACCGCGTGGC GCTGGCCGAC
CTGTTCGGCG CCCGTGCGGC GGGCACGCTG GTCACCCAGC GGTAG
 
Protein sequence
MKHWPILSTL LLTFAILAGC ATLDEQQRGW IFQPSDRSWG GSAELARDMQ NVWIGFDSTT 
TGRPVKLHGL WLPADKQQTG WNGAKAPLLL YLHGARWNVE GSAPRIRRMQ ELGFSVLAVD
YRGFGKSSPD LPSENMAYED AQAAWRWLAA HHPGQPRYIF GHSLGGAVAI ELASRVHDEA
GTIVEGTFTS IADVVSTMKW GWLPLSALIT QPFESVQKVA RLGSPLLVVH GTKDTMILPS
LGRKLYEAAQ QPKAFVLVEG GSHFNTNTLG QAQYRVALAD LFGARAAGTL VTQR