| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1154 |
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| Symbol | |
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| ID | 4687881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1225252 |
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| End bp | 1225899 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639834158 |
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| Product | ABC transporter related |
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| Protein accession | YP_981391 |
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| Protein GI | 121604062 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.496221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA ACATCAGCCA GCTCGGCAAG CGCTACGGCG ACACCATCGT CTTCAGCCAG
GTCAGCCTTA GCGTGGCGCC CGGCGAATTC GTCGCCATCG TCGGCGAGTC GGGCGTCGGC
AAATCGACGC TGCTCAACTG CATGGCCGGG CTCGACAGCT GGGACGAAGG CACGGTACTG
CTCAACGGCG CCGACCTGGG CGCGATGAGC GACGACCAGC GCGCGCTGCT GCGCCGCCGC
CATGTCGGCT TTGTGTTCCA GGCCTTTCAT GTGCTGCCGC ACCTAGACGT GGCGCAAAAC
GTCGCGCTGC CGCTGTTGCT GCTGGGCCAG CCCGACGACG CGCGCGTTCA AACGTTGCTG
GAAGCGGTCG GCCTGGGCGG ACTGGGGTCG CGCCTGCCGC AGCAGCTGAG CGGCGGGCAG
CTGCAGCGCG TGGCGATTGC GCGGGCGCTG GTGCATCGGC CCGGCCTGCT GCTGGCCGAC
GAGCCAACCG GCAACCTCGA CCCGGCCACC GCCGCCAGGG TGATGGACGC GCTGATCGCC
CAGACCCGCG AGCACGGCGC GGCGATGGTG CTGGTCACGC ATTCAGTCGC CGCCGCGGCG
CGCGCCGACC GGGTGCTGCA TTTGAGCGCC GACGGCATCA CCGACTGA
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| Protein sequence | MSLNISQLGK RYGDTIVFSQ VSLSVAPGEF VAIVGESGVG KSTLLNCMAG LDSWDEGTVL
LNGADLGAMS DDQRALLRRR HVGFVFQAFH VLPHLDVAQN VALPLLLLGQ PDDARVQTLL
EAVGLGGLGS RLPQQLSGGQ LQRVAIARAL VHRPGLLLAD EPTGNLDPAT AARVMDALIA
QTREHGAAMV LVTHSVAAAA RADRVLHLSA DGITD
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