| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1130 |
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| Symbol | |
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| ID | 4688058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1202668 |
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| End bp | 1204002 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834134 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_981367 |
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| Protein GI | 121604038 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCC ATTCCACACC GCTGATCACC GACCTGCAAG TGATCCCCGT CGCCGGCCGC
GACTCGATGC TGCTCAACCT GAGCGGCGCG CACGGCCCGT TTTTCACGCG CAACCTGCTG
ATCCTCACCG ACAACGCCGG GCGCACCGGC GTGGGCGAGG TGCCGGGCGG CGAGAAAATC
CGCCAGACGC TCGAAGATGC CCGTGCGCTG GTCGTCGGCC AGCCAATTGG CGACCACCAG
CGCGTGCTGC AGCAGATGCA CCAGCAGTTT GCCGACCGCG ACAGCGGCGG GCGCGGCCTG
CAGACGTTTG ATTTGCGCAC CACCATCCAT GCCGTGACCG CCGTCGAGTC GGCGCTGCTC
GACCTGCTGG GCCAGCACCT GGGCGTGCCG GTGGCGGCCT TGCTCGGCGA AGGCCAGCAG
CGGGGCGCGG TCGAGATGCT CGGCTACCTG TTCTTTGTCG GCGACCGCAC CCAGACCGGC
CTGGCCTACA ACAGCGAGCC CGGTGCCGAC AACGCCTGGT CGCGCGTCCG CCACGAAACG
GCCTTGACCC CCGAGGCCGT CGTGCGCCAG GCCGAGGCCG CGCACGAGCG CTATGGCTTC
AACGACTTCA AGCTCAAGGG CGGCGTGCTG CGCGGCGAGG AAGAAATCGA CGCTGTCACC
GCCTTGCACG AGCGCTTCCC GCAGGCGCGC GTCACGCTCG ACCCGAACGG CGGCTGGCTG
CTCAAGGACG CGATTCGCCT GATGCGGGAC ATGAAAAACG TCGTCGCCTA CGCCGAAGAC
CCGTGCGGCG CCGAAGACGG CTTCTCGGGC CGCGAGGTGA TGGCCGAGTT CCGCCGCGCC
ACCGGGCTGC CGACCGCCAC CAACATGATC GCCACCGACT GGCGCCAGCT GACGCACGCG
CTGGCGCTGC AGTCGGTCGA TATTCCACTG GCCGACCCGC ATTTCTGGAC CATGGCCGGC
TCGGTGCGCG TGGCGCAGAC CTGCCGCGAC TGGGGGCTGA CCTGGGGATC GCACTCAAAC
AACCACTTCG ATGTGTCGCT GGCGATGTTC ACCCATGTCG CCGCTGCCGC GCCGGGCCGC
GTCACGGCCA TCGACACGCA CTGGATCTGG CAGGACGGCC AGCGCCTGAC GAAGGAGCCG
CTGCAGATCG TCGGCGGACT GGTGGCGGTT CCCAAAAAGC CGGGGCTTGG CGTCGAGCTG
GACATGGCCG AGGTCGAGAA AGCCCATCAG CTCTACAAGC AGCACGGCCT GGGTTCGCGC
GACGATGCCG TTGCCATGCA GTGCCTGATT CCGAACTGGA CCTTCAACCC GAAACGTCCG
GCATTTGACA GGTAG
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| Protein sequence | MPTHSTPLIT DLQVIPVAGR DSMLLNLSGA HGPFFTRNLL ILTDNAGRTG VGEVPGGEKI
RQTLEDARAL VVGQPIGDHQ RVLQQMHQQF ADRDSGGRGL QTFDLRTTIH AVTAVESALL
DLLGQHLGVP VAALLGEGQQ RGAVEMLGYL FFVGDRTQTG LAYNSEPGAD NAWSRVRHET
ALTPEAVVRQ AEAAHERYGF NDFKLKGGVL RGEEEIDAVT ALHERFPQAR VTLDPNGGWL
LKDAIRLMRD MKNVVAYAED PCGAEDGFSG REVMAEFRRA TGLPTATNMI ATDWRQLTHA
LALQSVDIPL ADPHFWTMAG SVRVAQTCRD WGLTWGSHSN NHFDVSLAMF THVAAAAPGR
VTAIDTHWIW QDGQRLTKEP LQIVGGLVAV PKKPGLGVEL DMAEVEKAHQ LYKQHGLGSR
DDAVAMQCLI PNWTFNPKRP AFDR
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