| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1120 |
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| Symbol | |
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| ID | 4688857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1193049 |
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| End bp | 1194131 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834124 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_981357 |
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| Protein GI | 121604028 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATT TGTTTGACAA CCCGATGGGC CTGATGGGTT TTGAATTCGT CGAGTTCGCC
TCGCCCACGC CCGGCGTGCT CGAACCCGTG TTCGAACGCA TGGGCTTCAC CCTGGTGGCC
CGGCACCGCT CCAAGGACGT GGTGCTGTAC CGCCAGGGCG ACATCAACTT CATCGTCAAC
CGCGAACCCA AAAGCGTCGC CGGCTACTTT GCCGCCGAGC ACGGCCCGAG CGCCTGCGGC
ATGGCGTTTC GCGTCAAGGA TGCGCACCTT GCCTACAACC GCGCGCTCGA ACTCGGCGCG
CAGCCGATTG ACATTCCAAC CGGGCCGATG GAGTTGCGCC TGCCCGCCAT CAAGGGCATA
GGCGGCGCGC CGCTGTACCT GATTGACCGC TTCGAGGACG GCAAGTCGAT CTACGACATC
GACTTTGTGT TTCTTGATGG CGTGGACCGG CATCCGCCCG GCCATGGCCT CAAGCTCATC
GACCACCTGA CGCACAACGT GTACCGGGGC CGCATGGCGT TCTGGGGCGG CTTTTACGAA
AAGCTGTTCA ACTTCCGCGA GATCCGCTAC TTTGACATCC AGGGCGAATA CACCGGCCTG
ACGTCGCGCG CCATGACCGC GCCCGACGGC AAGATCCGCA TTCCGCTGAA CGAGGAATCC
AAGCAGGGCG GCGGCCAGAT CGAGGAGTTC CTGCTCAAGT TCAACGGCGA AGGCATCCAG
CACATCGCGC TGATCTGCGA CGACCTGCTG GCCACCGTGG ACAAGCTGCA GCTGGCCGGC
GTGCCGCTGA TGACGGCGCC CAGCGACAGC TACTACGAGA TGATCGACGC CCGCCTGCCG
GGCCACGGCC AGCCGGTGGC CGAATTGCAG ACGCGCGGCA TCTTGCTCGA CGGCAGCACC
GAAGGCGGCA CGCCGCGCCT GCTGCTGCAG ATCTTCTCGC AGCCGCAGCT CGGGCCGGTG
TTCTTCGAGT TCATCCAGAG GAAGGGCGAC GAAGGTTTTG GCGAGGGCAA CTTCAAGGCG
CTGTTCGAGT CGCTCGAGCG CGACCAGATC GAGCGCGGCG CGCTGAGCGT GGAGGCTGCA
TGA
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| Protein sequence | MADLFDNPMG LMGFEFVEFA SPTPGVLEPV FERMGFTLVA RHRSKDVVLY RQGDINFIVN
REPKSVAGYF AAEHGPSACG MAFRVKDAHL AYNRALELGA QPIDIPTGPM ELRLPAIKGI
GGAPLYLIDR FEDGKSIYDI DFVFLDGVDR HPPGHGLKLI DHLTHNVYRG RMAFWGGFYE
KLFNFREIRY FDIQGEYTGL TSRAMTAPDG KIRIPLNEES KQGGGQIEEF LLKFNGEGIQ
HIALICDDLL ATVDKLQLAG VPLMTAPSDS YYEMIDARLP GHGQPVAELQ TRGILLDGST
EGGTPRLLLQ IFSQPQLGPV FFEFIQRKGD EGFGEGNFKA LFESLERDQI ERGALSVEAA
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