Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1116 |
Symbol | |
ID | 4688034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1189617 |
End bp | 1190321 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639834120 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_981353 |
Protein GI | 121604024 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTCG AGAACCAAAC GGTGATGGTG ACCGGCGCGG CCGGCAACCT CGGGCAGGCG GTGGCCGCCG CCTTTGCCAG CCAGGGCGCG CGGCTGGTGC TGATCGGCCG ACAGACCGAA TCACTGCAGG CCGCCTTTGG CGACGCGGGC GACAAGCGCC TTTTCCTGGC CACCGACCTG CTCGACGGCG CGCAGGTCGC GGCCGCGCTG GCGGCGGCGG TGGCGCGCTT CGGGCGCGTC GATGTGCTGT GCAACCTGGC GGGCGGCTTT CGCATGGGCG ACGCGGTGCA TGAAACCGCC GACAGCACCT GGGATTTCCT GATGGACATC AACGCCCGCA CCGTCCTGAA CACGGCGCGG GCCGTGGTGC CGCACATGCT GGAGCACGGC GGCGGAAAAA TCGTCAATGT CGGCGCCTAT GCGGCGCAAA AAGGCGCGGC ACGCATGGCC GCCTACTGCG CGTCCAAGAG CAGCGTGATT CGCCTGACCG AAGCCATGGC GGCCGAACTG CGGGCCAGGA ACATCAACGT CAACTGCGTG CTGCCGACCA TCATCGACAC CCCCGAAAAC CGCGCGGCCA TGCCGGCGGC GGACCCGCTG CACTGGGTCG CTCCGAAGGA TCTGGCCAGC GTGATTGTTT TCCTGGCATC AAGTGCGGCC CGCGCGGTGC ATGGCGCGGC GCTGCCGGTG AGCGGCTTGA GCTGA
|
Protein sequence | MSFENQTVMV TGAAGNLGQA VAAAFASQGA RLVLIGRQTE SLQAAFGDAG DKRLFLATDL LDGAQVAAAL AAAVARFGRV DVLCNLAGGF RMGDAVHETA DSTWDFLMDI NARTVLNTAR AVVPHMLEHG GGKIVNVGAY AAQKGAARMA AYCASKSSVI RLTEAMAAEL RARNINVNCV LPTIIDTPEN RAAMPAADPL HWVAPKDLAS VIVFLASSAA RAVHGAALPV SGLS
|
| |