| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1093 |
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| Symbol | |
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| ID | 4687346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1159718 |
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| End bp | 1160932 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834093 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_981331 |
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| Protein GI | 121604002 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.560821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGC AAGCATTGCC CGGGAACCTG CACCCCGACA CGCTGGCCGT GCGTGTCGGC
ATCGAGCGCA GCCAGTACGG CGAGAACTCC GAAGCTCTGT ATTTGACCAG CGGCTTCGTG
CAGCCCGACG CCGAAACCTC GGCGCGCCGT TTTGCCGGCA CCGAAGAAGG CTTTACCTAC
GCCCGCACGT CGAACCCGAC GGTGGCCGCT TTTGAGCAGC GGCTGGCGGC GCTGGAAGGC
ACTGAAGCCG CCATCGCCGC GTCCAGCGGC ATGGGCGCCA TCCTGATGAT GGGCATGGGC
CTGCTCAGGG CCGGCGACCA TGTCGTGTGT TCGCAGTCGG TGTTCGGCTC GACGCTGAAC
CTGTTCGGCA AGGAGTTCGC CAAGTTCGGC GTCGAGACCA GCTTTGTCTC GCAGACCGAC
ATCGCGCAGT GGCAGGCCGC CATGCGTCCT AATACGAAGC TGCTGTTTGC CGAAACTCCG
ACCAATCCGC TGACAGAGGT GTGCGACATC CGGGCGCTGG CCGATGTGGC GCATGCGGGC
GGCGCGCTGC TGGCGGTGGA CAACTGTTTT TGCTCGCCCG CGCTGCAGCG GCCGACTGAA
CTGGGCGCCG ACCTGGTGAT CCACTCGGGC ACCAAGTACC TCGACGGACA GGGCCGGGTC
ATGGCGGGGG CGATTTGCGG GCCTTCGAAG CTGATCGTCG ATGTGTTCGG CCCGATTGTG
CGCACCGCCG GCATGGTGCT GGCGCCGTTC AATGCCTGGG TCGTGCTCAA GGGCATGGAA
ACGCTGCGCA TCCGCATGCA GGCGCAAAGC GCCACGGCGC TGGCGATTGC GCAATGGCTG
GAAACGCATC CGGCCGTGAC CCGCGTGTAT TACCCCGGCT TGCCGTCGCA CCCGCAGCAC
GAACTGGCGA TGCGCCAGCA GTCGGGTTTG GGCGGCGCCG TGGTGTCCTT CGACGTGCGC
GGCGGCGACC CGGAGACGGC GCGCGCCAAT GCTTTCCATG TGATCAACAG CACGCAGGTG
GTCAGCATTG CCACCAACCT GGGCGACACC AAGTCCATCA TCACCCATCC CGGAACCACT
TCCCATGGCC GGCTCACCGA AGCGCAGCGC CAGGCAGCCG GCATCAAGCA GGGCCTGATC
CGCTTTGCCA CCGGCCTGGA ACATATCGAC GATTTGAAAG CCGACCTCGC ACGCGGTCTG
GACAGCCTGA CATGA
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| Protein sequence | MTRQALPGNL HPDTLAVRVG IERSQYGENS EALYLTSGFV QPDAETSARR FAGTEEGFTY
ARTSNPTVAA FEQRLAALEG TEAAIAASSG MGAILMMGMG LLRAGDHVVC SQSVFGSTLN
LFGKEFAKFG VETSFVSQTD IAQWQAAMRP NTKLLFAETP TNPLTEVCDI RALADVAHAG
GALLAVDNCF CSPALQRPTE LGADLVIHSG TKYLDGQGRV MAGAICGPSK LIVDVFGPIV
RTAGMVLAPF NAWVVLKGME TLRIRMQAQS ATALAIAQWL ETHPAVTRVY YPGLPSHPQH
ELAMRQQSGL GGAVVSFDVR GGDPETARAN AFHVINSTQV VSIATNLGDT KSIITHPGTT
SHGRLTEAQR QAAGIKQGLI RFATGLEHID DLKADLARGL DSLT
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