| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1073 |
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| Symbol | |
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| ID | 4686702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1139432 |
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| End bp | 1142908 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834073 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_981311 |
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| Protein GI | 121603982 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00830683 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.406928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGC CAGCAAACCT CCACCAGGAA AATATCCGCA GCATCCTGAC GCGCAACATC
AGCCTGCCGC TGGGCGTTGG CGCACTCAGC GCCGCTGTGT TTGTCGGCCT GATCTTCTAC
CTGCTGTCCG CCTTGGGCGG GGTCGAGCAG ACAGAGCGGG CTATCAGCAA CGCCAACCAG
ATCGGCAAGC TGGGCGCCGA CATGGAAACC AGCATGTACG GCTACCTGGT GACCGGCGAG
GAATCGCTGC TGCAGCCTTT TGAAATCGGC AAGCCGCGCA TCGCCGCCGA AACCGTCTCG
CTAAGCGAAC TGGTCAAGGG CAACCGCGAA CAGGTCAGCC GGCTCAGGCG CATCGGCGCG
CTGCAAAAGC AATGGAACGA GTTTGCGCAA GCCATTGTTG CCCTGCGCCG CAAAGACCTC
AACTACCAGG AGCCGGTCCG TTCCGCCGGG GGACGCAGCC TGACGAACGA AATCCGGCGC
GAATTCTCGG AATTCATCGG CATCGAAGAG CGCCTGCTGC AGCAGCGCAA CGAGCAGACC
CGAAGCATCA CGTTCTGGGG CATGGCGGCT TACTTGCTGT TCAGCCTGGG CCTGAGCGGC
CTGCTGGCGC TGATGGGCCG GCGCGAACTG ATGCGCCTGT CCGACACCTA TGGCGAGGCC
GAGCAGCAGC AGGCCGCCAC GGCGCTCCTG CTGGAGCAGC AGCTCTGGCT GCGCACCGGC
CAGCGGCAAC TGGCCGAGCA CACCATTGGC CAGCAGGCGC TCGAATCGCT GGGCCGCAGC
GTGCTGGAAT TCGTGGCGCG CTATCTTGAC GTGGCCGTCG CAGCCCTGTA TGTGAAGGAA
AACAACGGCA ATTTGCGCCG CGTCGCCGCC TATGGTTTCA GCCAGAATGA CGAAAGCACC
GGGCAATCGT TTTACCTCGC CGAAGGCCTG GTCGGCCAGG CAGCCCTTGA AAACCGGGTG
CTGCAGCTCG ACAACCTGCC CGACGACTAC CTCAAAATCA CCTCCGGCCT GGGCCAGGGC
TCAGCCAGGC ATGTGCTGCT GGTGCCGGTG CATAACGACG GGCAGGTCAA CGGCGTGGTC
GAGCTTGGGT TTTTACGGCC GCTAGGGCCC CGCGACCTGG AGTTCGTCAA CATGACGGCC
AACAACATCG GCAATTCCAT TCACGCGGCG CTCTACCGCC GCCAGCTTCA GGACATGCTG
GCGGAAACCC AGCGGCTCAA TGAAGACCTC CAGGCGCAGC AGGAAGAATT GCTCATCGCC
AACGAAGAAC TGGAAGAAAA GTCCCGGGTG CTCAAGGAAT ACCAGGTGAG CCTGGAAAAC
CAGCAGGCCG AACTGGAGCA GACCAACGAG CAGCTGTCCG AGGTGGCGCT GTCGCTGGAC
CACAAGAACG TGGCGCTCAG CCAGGCGCAA ATCCAGCTGG AGGAGCGCGC CGAGGAGCTG
AGCCGGGCCA GCCGCTACAA GTCCGAGTTC CTGGCCAACA TGTCGCACGA GCTGCGCACG
CCGCTGAACA GCTCGCTAAT CCTGTCCAAG CTGCTGTCGG ACAACCAGAA GGGCAATCTT
GATGCGGAGC AGGTCAAGTT TGCGCAATCG ATTTACTCGG CCGGCAATGA CCTGCTCAAC
CTGATCAACG ACATCCTGGA TATTTCAAAA GTCGAAGCCG GAAAACTCCA ACTCTCGCCT
GAAACCATCC TGCTTGGCGA TCTGGCCGCC TCCCTCAACA GCACGTTTGG TCCGCTGGCC
GGCCAGAAAA ACCTGGCGTT CGAGGTCGTG GTCGAGCCGG GCACGCCGGC CACGCTGGTG
TCAGACCGCC AGCGCGCCGA GCAAATCCTG AAAAACCTGC TGTCCAACGC CATCAAGTTC
ACCGAAGCCG GCCGCGTCAG CCTGAGCGTG TCGCCCCAGC CCGGCGGCAT GATCGGCTTT
GCAGTGCAGG ACTCGGGCAT CGGCATTCGC CAGGAGCAGC AGCAGATTAT TTTCGAGGCG
TTCCGCCAGG CCGACGGCAC GACCAGCCGG CGCTACGGCG GCACCGGCCT GGGCCTGTCG
ATCTCGCGCG ACCTCACCGC GCTGCTGGGC GGCTCCATCA CGGTGCAGAG CCAGGTGGGC
CGGGGCAGCG TCTTCACGCT GCTGCTGCCG GCCCTCTGGA GCCAGCGGCA GTTGCTGTCC
GAATCGTCAA AAGTCCTGCC GCCACCGGCC GCCACGCAGC CAGCGCAAGC GCTGGCTGCC
GGATTCCCGG CCTTGCCCGG TGCTAGCGCG CCGGTGCCGA CCTTTCCCGA CGACCGCCAC
CGGGCCGCCA GCGGCCGCCT GGTGCTGGTG ATTGAAGACG ATGTAGTTTT TGCGCAAGTC
CTGTACGACC TGGCCCATGA GTTGAACTAC AGCTGCCTGG TCGCGCACGG CGCCGAAGAC
GGTTTTGCGC TGGCGACCCA GTTTGTTCCC AATGCCATCC TGCTGGACAT GGGCCTGCCC
GACCGGCCGG GCTTGTCGGT GCTGCAGCGG CTCAAGGAAA ACCCGCACAC CCGCCATATC
CCGGTGCATG TGGTGTCGGG CGATGACCGC AGCGAGGCGG CCCTGCAGAT GGGCGCCATT
GGCTACGCCC TCAAGCCGAC CTCCCGCGAC CAGCTCAAGG AGGTCTTCAG GAAACTTGAA
GACAAGCTGA CACAGAAAAT CAAGCACGTG CTGCTGGTCG AAAACGATGC CCTGCAGCGC
ACCAGCCTGA TGGAGCTGAT TGGCGATGAC GACGTGCAGA TCACGGCGGT GGCCACCGGC
GGGGAAGCGC TGGCGCTGCT GGCCGGCACC ATTTTTGACT GCATGATCAT CGACCTCAAG
CTGCCCGACA TCCAGGGCTA CGAGTTGCTC CAGCGCATGT CCACCGAAAG CATCGGTTCC
TTTCCGCCCG TCATTGTCTA TACCGGACGC ACGCTGACGC GCCAGGAAGA AGCCGACCTG
CTGAAGTATT CACGCACCAT CATCATCAAG GGCGCGCGCT CACCCGAACG CCTGCTCGAT
GAAGTTACCC TCTTCCTGCA CAAGGTCGAT TCAAGCTTGT CGGCCGAACG GCAAACCCTG
CAGAAGATCG CCCGCAACCG GGACAGCGTG TTTGAAGGCC GCAAGGTTCT GCTGGTGGAC
GACGATGTGC GAAACATCTT TGCCCTGACC AGCGCCCTGG AAAACAAGGG CCTGCGGGTG
GAAATCGGCC GCAATGGCTT CGAGGCCATC AGCAAGCTCA ACGACGTCAG CGACATCGAC
CTGGTGCTGA TGGACATCAT GATGCCGGGC ATGGACGGCC TGGAAGCCAC GCGCCGCATC
CGCCAGGACG CGCGTTTCCC GAAGCTGCCC ATCATCGCCG TTACCGCCAA GGCCATGAAG
GACGACCAGG AGCAGTGCCT GGAAGCCGGC GCCAATGACT ACCTGGCCAA GCCGATTGAT
CTTGATCGCC TGTTTTCCTT GCTGCGCGTC TGGATGCCGG ACATGGAACG GCCCTGA
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| Protein sequence | MTGPANLHQE NIRSILTRNI SLPLGVGALS AAVFVGLIFY LLSALGGVEQ TERAISNANQ
IGKLGADMET SMYGYLVTGE ESLLQPFEIG KPRIAAETVS LSELVKGNRE QVSRLRRIGA
LQKQWNEFAQ AIVALRRKDL NYQEPVRSAG GRSLTNEIRR EFSEFIGIEE RLLQQRNEQT
RSITFWGMAA YLLFSLGLSG LLALMGRREL MRLSDTYGEA EQQQAATALL LEQQLWLRTG
QRQLAEHTIG QQALESLGRS VLEFVARYLD VAVAALYVKE NNGNLRRVAA YGFSQNDEST
GQSFYLAEGL VGQAALENRV LQLDNLPDDY LKITSGLGQG SARHVLLVPV HNDGQVNGVV
ELGFLRPLGP RDLEFVNMTA NNIGNSIHAA LYRRQLQDML AETQRLNEDL QAQQEELLIA
NEELEEKSRV LKEYQVSLEN QQAELEQTNE QLSEVALSLD HKNVALSQAQ IQLEERAEEL
SRASRYKSEF LANMSHELRT PLNSSLILSK LLSDNQKGNL DAEQVKFAQS IYSAGNDLLN
LINDILDISK VEAGKLQLSP ETILLGDLAA SLNSTFGPLA GQKNLAFEVV VEPGTPATLV
SDRQRAEQIL KNLLSNAIKF TEAGRVSLSV SPQPGGMIGF AVQDSGIGIR QEQQQIIFEA
FRQADGTTSR RYGGTGLGLS ISRDLTALLG GSITVQSQVG RGSVFTLLLP ALWSQRQLLS
ESSKVLPPPA ATQPAQALAA GFPALPGASA PVPTFPDDRH RAASGRLVLV IEDDVVFAQV
LYDLAHELNY SCLVAHGAED GFALATQFVP NAILLDMGLP DRPGLSVLQR LKENPHTRHI
PVHVVSGDDR SEAALQMGAI GYALKPTSRD QLKEVFRKLE DKLTQKIKHV LLVENDALQR
TSLMELIGDD DVQITAVATG GEALALLAGT IFDCMIIDLK LPDIQGYELL QRMSTESIGS
FPPVIVYTGR TLTRQEEADL LKYSRTIIIK GARSPERLLD EVTLFLHKVD SSLSAERQTL
QKIARNRDSV FEGRKVLLVD DDVRNIFALT SALENKGLRV EIGRNGFEAI SKLNDVSDID
LVLMDIMMPG MDGLEATRRI RQDARFPKLP IIAVTAKAMK DDQEQCLEAG ANDYLAKPID
LDRLFSLLRV WMPDMERP
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