Gene Pnap_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1033 
Symbol 
ID4689360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1092586 
End bp1092918 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content56% 
IMG OID639834032 
Productcytochrome c, class I 
Protein accessionYP_981271 
Protein GI121603942 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.30031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.50008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA ATGCAATTTC AATTGCGGTC CTTGCGGGCG CGCTCGGTGT CTGCGCTCCA 
GCTTTTGCGG ACGCCACATT GGTGAGCGAG AAGCAATGCA TGCAGTGCCA CAAGGTGAAG
GAAGATTTCG CCGGACCTTC GTTCCAGAAA ATCGCCGCCC GCTGGAAAGG CAAGAAGAAT
GCCGAAGAAA TGCTGGTGGC CACCATCCGA AAGGGCAGCG GGCGTGAAGG GCTGGAGCAC
TGGGGCAAGG CAAGGATGCC CGACGACTCG GAGCGTCCCT TGGTCAGCGA GGACGAGGCC
AAGAAAATGG TCAAGTGGAT ATTGACTCAA TAA
 
Protein sequence
MKINAISIAV LAGALGVCAP AFADATLVSE KQCMQCHKVK EDFAGPSFQK IAARWKGKKN 
AEEMLVATIR KGSGREGLEH WGKARMPDDS ERPLVSEDEA KKMVKWILTQ