| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1023 |
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| Symbol | |
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| ID | 4686275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1082381 |
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| End bp | 1083970 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834022 |
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| Product | benzoylformate decarboxylase |
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| Protein accession | YP_981261 |
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| Protein GI | 121603932 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.624401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAA CTGTCCGCGA AGCCGTGCTC GACCTGCTGC GCGCCTTCAA CATGACCACG
ATTTTTGGCA ACCCCGGCTC GACCGAGCTG CCGCTGTTCC TGGATTTCCC CGACGACTTC
CGCTATGTGC TGGGGCTGCA GGAGTCCGTG GTGGTCGGCA TGGCCGACGG CTACGCGCAG
GCCACGCACA ACGCGGCTTT TGTCAACCTG CATTCGGCCG CCGGCGTGGG CCACGCGATG
GGCAACATCT TCACCGCCCA CAAGAACCGC ACGCCGATGG TGATCACCGC CGGCCAGCAG
GCCCGGTCCA TTTTGCCGTT TGACCCGTTT TTGTTTTCCG GCCAGGCGAC CGAGCTGCCC
AAGCCTTACG TCAAATGGAG CATCGAGCCG GCCAGGGCCG AAGACGTTCC GCTGGCGATT
GCGCGCGCCT ACTACATCGC CATGCAGCAG CCGCGCGGCC CGGTGCTGGT GTCGATTCCG
GCCGACGACT GGACGCGCCG CTGCGAGCCG GTCGCGGCCC GCCGCGTCAG CACCGAAACC
CGGCCCGAGC CGCAACTGCT GGCCCTGATT GGTGACGCGC TCGATGCGGC AAAGCGCCCG
GCTTTCGTGG TCGGCGCCGC CGTGGACCGC GACCGGGCCT GGGACGACGT GGTTCGGCTG
GCCGAACGCC ACAATGCCGC CGTCTGGGTC GCGCCGATGT CGGGCCGCTG CGGCTTTCCG
GAAGACCACC GGCTGTTCGC CGGTTTCCTG CCGGCGATGC GCGAAAAAAT CGTCGCCCTG
CTGGCCGGCC ACGACCTGGT CTTTGCGCTG GGCGCGGCCG CCTTCACCTA CCACGTCGAG
GGCGCCGGCC CGCACCTGCC CGCCGGCGCC GAACTGGTGC AGCTGATCGA AGACCCGGCC
ATTGCCGCCT GGGCGCCCGA AGGTACGTCC GCCGTCGGCG GCATCCGCCT GGGCGTGCAG
GATTTGCTGG CCCGCCCGGT GCCACCCGCG CTCGCCGACC GCGAAGACCC CCAGCCGCGC
GCGCTGCCGG CCCGCGCCGA ACCGGGCGCA AGCGGCGAGC TGATGAGCGT GGCTTTTGTC
ATGCAGACCC TGGCCGAGGT GCGCGACGCG CATTCCATCG TGGTCGAGGA AGCGCCGAGT
TCGCGCCCGG TGATGCAGGC CCATTTGCCG ATCCTGCACA GCGAAACCTT CTACACCATG
TGCAGCGGCG GCCTGGGCCA TGGCATGCCG GCGGCCGTCG GCGTGGCGCT GGCCAAACCC
GGCAAGAAAG TTATCGGCCT GCTGGGCGAC GGCTCCAGCA TGTATTCGAT CCAGGCGCTG
TGGAGCGCGG CGCAACTCAA GCTCCCGATC ACCTTCATCA TTTTGAAAAA CCGCCGCTAC
GCCGCGCTGC AGGAGTTCGC GCCGACCTTT GGCTTCAAGC CCGGCGAAAC CCTGCAGGGC
ACCGACCTGC CCGAACTCGA CTTTCTGGCA CTGGCGAGGG GCCAGGGCTG CGACGCGGTG
AATGTGGTTG ACGCCGACCA GCTCGCCGAC GTGTTGCGGG AGGCCTTGAA CTCACCCCGG
CCGATTCTGG TCGAGGTGGA CGTGGCTTGA
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| Protein sequence | MTTTVREAVL DLLRAFNMTT IFGNPGSTEL PLFLDFPDDF RYVLGLQESV VVGMADGYAQ
ATHNAAFVNL HSAAGVGHAM GNIFTAHKNR TPMVITAGQQ ARSILPFDPF LFSGQATELP
KPYVKWSIEP ARAEDVPLAI ARAYYIAMQQ PRGPVLVSIP ADDWTRRCEP VAARRVSTET
RPEPQLLALI GDALDAAKRP AFVVGAAVDR DRAWDDVVRL AERHNAAVWV APMSGRCGFP
EDHRLFAGFL PAMREKIVAL LAGHDLVFAL GAAAFTYHVE GAGPHLPAGA ELVQLIEDPA
IAAWAPEGTS AVGGIRLGVQ DLLARPVPPA LADREDPQPR ALPARAEPGA SGELMSVAFV
MQTLAEVRDA HSIVVEEAPS SRPVMQAHLP ILHSETFYTM CSGGLGHGMP AAVGVALAKP
GKKVIGLLGD GSSMYSIQAL WSAAQLKLPI TFIILKNRRY AALQEFAPTF GFKPGETLQG
TDLPELDFLA LARGQGCDAV NVVDADQLAD VLREALNSPR PILVEVDVA
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