| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1019 |
|---|
| Symbol | |
|---|
| ID | 4686567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1077549 |
|---|
| End bp | 1078553 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639834018 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981257 |
|---|
| Protein GI | 121603928 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.100584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.433272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAA AATACGCATC AAAAAGGCCT TTTTCGCATA TACAGCGGTC GCTTATTGCT
CTTTTTTTAG GAGCATCTAT GATCACGCCG CTGACGGCGC TGGCGCAGGC CTGGCCGGCC
AAGCCGATCC GGGTCATCGT CAACTTTCCG CCCGGCGGCG CGGCGGACCA GATTGCGCGC
GCCATCACCC TGCCCCTGCA GGAAGCGCTC GGCCAGCCGG TGATCGTGGA CAACCGGGCA
GGCGCCGGCG GCAATATCGG CGGCGACGCG CTGGCCAAGT CGCCGCCTGA CGGCTACACG
CTGCTGCTGA CTTCGGGCGG GCTGGTATCG ATCAACCCGG CCATCTACCC CAAGATGTCG
TTTGACCCGG CCAGGGACAT CATTCCCGTG GCGGCGGCGG CCCGCGTGCT GGTGTTCCTG
GAGGTCAAGC CGTCGCTGCC GGTGAAGAAC GTGAAAGAAT TCATCGCCTA TGCCAAGGCG
AATCCCGGCA AGCTGACCTA CGCCTCGCCC GGCAACGGCT CGTCGCCGCA TCTGGCCGGA
GAAATGTTCA AAGACATGAC GCAGAGCTTT TCAGTGCACG TGCCCTACCG GGGCGCGGCG
CCCGCGATGC AGGACTTGCT GGGCGGGCAG GTGGATTTCA TGTTCGACCC GGGCATCGGC
CTGAACCATG TGCGCGCCGG CAAGCTCAGG CTGCTGGCCG TGGGCAGCCC AAAGCGCTCG
CCGCTATTCC CCGACGTGCC GACGCTCAGC GAAGTCGGAC TCAAGGGCTT TGACGCCGAC
ACGGTGTTCG GCTTTTATGC GCCCACTGGC ACGCCGGTCG CCATCGTCAC CCGGCTGAAC
AGCGAGATCA ACAAAATCCT CGCCACCCAG GCGGTGAAGG ACCGCGTTGC CGGACTCGGC
GGTGAAGTGG CACCCATGAC GCCCGCCGAA TTCGGCGCCA AGGCGCACGA GGACACGGCG
CGCTTCAGCA AGCTCATCAA GGACCGGCAC ATCTCGGGGG ATTGA
|
|---|
| Protein sequence | MIQKYASKRP FSHIQRSLIA LFLGASMITP LTALAQAWPA KPIRVIVNFP PGGAADQIAR
AITLPLQEAL GQPVIVDNRA GAGGNIGGDA LAKSPPDGYT LLLTSGGLVS INPAIYPKMS
FDPARDIIPV AAAARVLVFL EVKPSLPVKN VKEFIAYAKA NPGKLTYASP GNGSSPHLAG
EMFKDMTQSF SVHVPYRGAA PAMQDLLGGQ VDFMFDPGIG LNHVRAGKLR LLAVGSPKRS
PLFPDVPTLS EVGLKGFDAD TVFGFYAPTG TPVAIVTRLN SEINKILATQ AVKDRVAGLG
GEVAPMTPAE FGAKAHEDTA RFSKLIKDRH ISGD
|
|---|
| |