Gene Pnap_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0979 
Symbol 
ID4688187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1030720 
End bp1031730 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID639833978 
Productresponse regulator receiver protein 
Protein accessionYP_981217 
Protein GI121603888 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA GCCGCCTGGA CCGCACACTG GACCGCGCCA ACAGCGACGT GGTGCTGATC 
GTTGACGACG TGCCCGACAA CCTGGCGGTG CTGCATGACG CCCTTGATGA GTCGGGCTAC
ACCGTGCTGG TGGCCACCAG CGGCGAAGCC GCGCTGCAGC GCGCCCGGCA GGCCGTGCCC
GACATCGTGC TGCTCGACGC CATGATGCCC GGCATGGATG GCTTTGAAGT GGCAAGGCGA
CTCAAGGCGA TGCCGGAAAC CGCGCACATT CCCATCATCT TCATGACCGG CCTGACCGAA
ACCGAGCACC TGGTGGCCGC CTTGCAGGCC GGCGGCGTGG ACTATGTGAC CAAGCCGATC
AAGCCCAAGG AAGTCATGGC GCGCATGGGC GTTCATCTGC AGGGCGCGCG CCGCGCCCGG
CAGGAAGCCC GGCAGGCGGG CCAGGCGCGC AACGCGCTCG ACGCGTTTGG CTACGCCAGC
ATGACCGTGC GCATGCATGC CGATGGCAAG GAAGATGGCA AGCTGATCTG GCAAACGCCG
CTGGCGCGCG AGTTGCTCAT GCGCTACTAC GGCACCACGG CGCCGCAAAC GCCCGAACCG
GTCCTGGAAT GGCTGCGCCG CCATCTGCCA GATGCCGAGC GCCAGATCGA GCCGCCGCGC
CTGACGGTGG AGCAGGGGCC GCGCCGCCTG ACGTTCCGGC TGCACCAGCA AACCGAGGGC
AGCGACAGCG GCGGCGACTG GCTGATCGTG ATGCGCGAGA TTTCGGACGA TGCCGTGGTC
GAGGCGATAG CCTTGAGCTT CAAGCTCACC GCCCGGGAGG CCGAGGTGCT GTACTGGGTG
GTCAAGGGAA AGGTCAACCG CGACATTGGC GACATCCTGG GCGCCAGCCC GGCAACGATC
AAAAAACACC TGGAGCGCGT GTACGCCAAG CTGGGCGTGG AAACCCGCAC CGCCGCCGCC
GGCCGGGCCA TGAACCGCAT CCGGCAGCTT CATCCGCAGT TCGAGTGCTG A
 
Protein sequence
MPDSRLDRTL DRANSDVVLI VDDVPDNLAV LHDALDESGY TVLVATSGEA ALQRARQAVP 
DIVLLDAMMP GMDGFEVARR LKAMPETAHI PIIFMTGLTE TEHLVAALQA GGVDYVTKPI
KPKEVMARMG VHLQGARRAR QEARQAGQAR NALDAFGYAS MTVRMHADGK EDGKLIWQTP
LARELLMRYY GTTAPQTPEP VLEWLRRHLP DAERQIEPPR LTVEQGPRRL TFRLHQQTEG
SDSGGDWLIV MREISDDAVV EAIALSFKLT AREAEVLYWV VKGKVNRDIG DILGASPATI
KKHLERVYAK LGVETRTAAA GRAMNRIRQL HPQFEC