Gene Pnap_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0972 
Symbol 
ID4688275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1022673 
End bp1023371 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID639833971 
Producturease accessory protein UreF 
Protein accessionYP_981210 
Protein GI121603881 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCAAG CGGCCGAAAC CCTGCCAGCG GCCAGCCTGC TCCAGCTGAT CTGGCTCGCC 
TCCCCGGCCT TGCCCGTGGG CGGGTTTTCT TACTCGGAAG TGCTTGAAGC GGCCGTGGAC
CGGGCGGGTG TAGCTACGGA AAGCATAGCG TCCGACTGGC TGGCCGACCA GCTTTACCTG
ACGCTGGCGC GCGGCGACCT GGCCGTGATT GCCCAGGCGA TTCCAGCCTG GCGCGCCAGC
GACCTGCCAC GCATCCAGCA ACTCAACGAC TGGGTTCTGC AGACCCGTGA ATCCAGCGAG
CTGCGGCTGC AGGCCGAGCA GATGGGCCGC TCGCTGCTCG ACTGGCTGCG CAACCATGAC
GGCGCCAACG CAGCGCACAT CGCCGCCTGC GCCCGCATGC AGCCGACCTA TCCGGTCGCG
TTTGCGTTGG CCGCATCGCA GCTAGAGGCC GGCGTGCGCG ACTGCCTGCT GGCCTATGCC
TTTGGCTGGG CCGAGAACAT GATGCAGGCC GCGCTCAAGT CGGTGCCGCT GGGCCAAAGC
GCCGGCCAGC GCATCCTGGC GCGCCTGAGC CGCGACATTC CGGCGGCGGT CGAGTCGGCC
CTGCGGCTGC CCGACAGCGA ACGCCAGGCG TTTTCCCCCA TGCTGGCGAT TTTGTCGGCC
CAGCATGAAA CCCAGTATTC GCGGCTGTTT CGCTCCTGA
 
Protein sequence
MTQAAETLPA ASLLQLIWLA SPALPVGGFS YSEVLEAAVD RAGVATESIA SDWLADQLYL 
TLARGDLAVI AQAIPAWRAS DLPRIQQLND WVLQTRESSE LRLQAEQMGR SLLDWLRNHD
GANAAHIAAC ARMQPTYPVA FALAASQLEA GVRDCLLAYA FGWAENMMQA ALKSVPLGQS
AGQRILARLS RDIPAAVESA LRLPDSERQA FSPMLAILSA QHETQYSRLF RS