Gene Pnap_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0948 
Symbol 
ID4689903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1000500 
End bp1000823 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content66% 
IMG OID639833946 
Productmalonate decarboxylase subunit delta 
Protein accessionYP_981186 
Protein GI121603857 
COG category 
COG ID 
TIGRFAM ID[TIGR03130] malonate decarboxylase acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.798455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT TTGATTTTCA GTACCCTGCG GGGCAGCCTG CTTCCGGGCG GGTGATGGTC 
GGCGTGGTCG GCTCCGGCGA CCTTGAAGTG CTGCTGGAGC CGGGCATTGC GGGACAGACC
CGCGTGCGCG TGACCACATC GGTCAATGGC TATGGCGCCG TCTGGCAGGC GCAGCTCGAC
CGCCTGTTCA AGGCCGATGC GCAGGGCTGG CCTGCGGTAG CGCTTGAAAT CAACGACTTT
GGCGCGACGC CGGGCGTGGT CGGCATGCGC GTGGCGCAGG CTTTCCAGTC GCTGGGCGAC
GCTGCGGCAG GAGAAAAACC ATGA
 
Protein sequence
METFDFQYPA GQPASGRVMV GVVGSGDLEV LLEPGIAGQT RVRVTTSVNG YGAVWQAQLD 
RLFKADAQGW PAVALEINDF GATPGVVGMR VAQAFQSLGD AAAGEKP