| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0897 |
|---|
| Symbol | |
|---|
| ID | 4688888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 948167 |
|---|
| End bp | 948859 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639833893 |
|---|
| Product | peptidyl-tRNA hydrolase |
|---|
| Protein accession | YP_981135 |
|---|
| Protein GI | 121603806 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
|---|
| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.185924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGCGT CCAGGTGCTT CTGCTACGCT TTCCCGCCCT CCTCTTTCTT TTTTGCACAC
GACATGATCA AACTGTTTGT TGGCCTGGGC AATCCTGGTC CCGAGTACGA AGCCACGCGC
CACAATGCCG GATTTTGGTG GATTGATGCG CTGTCGCGTG AATTGAAGGC GCCGCTCAGC
CTGGACAAGA ACTACCACGG CCAGGTGGCC CGCACCACCG TCAACGGCCA GACGGTGTGG
CTGCTCAAGC CGCTGACCTT CATGAACCTG TCGGGAAAAT CAGTGGCGGC ACTGGCCCGG
TTTTTCAAAA TCTCGCCGGC CGAGATACTG GTGGCGCATG ACGAACTCGA CATTGTTCCC
GGCCAGGTCA AACTCAAGTT CGGCGGCAGC CATGCGGGGC ACAACGGCCT GCGCGACATC
CATGCGCAAC TCGGCTCGGC GGACTACTGG CGCTTGCGGA TTGGCGTGGG GCACCCGGGC
GTTAAAGCCG AAGTCATCAA CTGGGTACTG AAAAAGCCTT CGCAGGAGCA TCGCGTGGCG
ATTGAAGACT GCATTGACCG CTGTCTCAAG GCGGTGCCCG AACTGCTCAA GGGCGAGATG
GAAAAAGCCA CGATGATGAT TCACACCAGC CAGCCACCCC GGCCGAAACC GCCACGGCCT
GCCTCGGCAG ACAGCGCACC AAAGCTGCTC TAG
|
|---|
| Protein sequence | MGASRCFCYA FPPSSFFFAH DMIKLFVGLG NPGPEYEATR HNAGFWWIDA LSRELKAPLS
LDKNYHGQVA RTTVNGQTVW LLKPLTFMNL SGKSVAALAR FFKISPAEIL VAHDELDIVP
GQVKLKFGGS HAGHNGLRDI HAQLGSADYW RLRIGVGHPG VKAEVINWVL KKPSQEHRVA
IEDCIDRCLK AVPELLKGEM EKATMMIHTS QPPRPKPPRP ASADSAPKLL
|
|---|
| |