| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0875 |
|---|
| Symbol | |
|---|
| ID | 4688220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 928765 |
|---|
| End bp | 929532 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639833871 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981113 |
|---|
| Protein GI | 121603784 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.656742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTTCCC GCCTGCTGAC GCTTCCCCCA CTCCTGTCCC GGCTGCCCTG TTTGGCCAGC
CAGTGCGCCG TTTGCCGCAG CTGGCCCGCA GAGCAGGTCT GCCAGCCGTG CCTGGCGCGG
TTCAGGCCAT CAGAGCCGCG CTGCTTCAGC TGCGCCCTGC CCCTGCCGGC CGATCTGTCC
ATGGGCCTGC GCAGCACCGG CCCCCGGCAT TGCGCCGAGT GCATGCGCCA GCACCCGCCG
CTGGACAGCA CGCTGGCCGC CGTGCCTTAT GCCTATCCGT GGTCCACGCT GATTACCCGC
TACAAGTTTG GCGAGCAGCA CGGCTGGGCC GGCTTTTTTG CCAGCCTGCT GCTCAAAACG
CCGGGCGTGG CGCAGGCACT GGACGAACTG GACGCGCAGG ACTGGCTCAT TGCCCTGCCG
CTGTCGGCCG AGCGGCTGCA GACGCGCGGT TTCAACCAGG CGTGGGAGCT GGCCAGCGCC
CTGGCCCGCC AGTCCCGGAC CCGTGGGCAA TCCGATGCCC GGCTGCTGCT CCGCCTGAAG
CACACGCGTC CGCAAAGCCA GCTCAGGCGC GAAGCCCGGC TGGCCAACGT CCGGGGCGCT
TTCCAGGTCG ATCCGCTGCG CGCGCCCCAA CTGCAAGGCC GGCGCGTGGT GCTGGTCGAT
GACGTGATGA CCAGCGGCGC TTCGCTGTTT GCGGCGGCGC AGGCCTTGCG GGATGCGGGC
GCGGCGCGCA TCACCGCCGT GGTGCTGGCG CGCACGCCGC CCGCCTAG
|
|---|
| Protein sequence | MFSRLLTLPP LLSRLPCLAS QCAVCRSWPA EQVCQPCLAR FRPSEPRCFS CALPLPADLS
MGLRSTGPRH CAECMRQHPP LDSTLAAVPY AYPWSTLITR YKFGEQHGWA GFFASLLLKT
PGVAQALDEL DAQDWLIALP LSAERLQTRG FNQAWELASA LARQSRTRGQ SDARLLLRLK
HTRPQSQLRR EARLANVRGA FQVDPLRAPQ LQGRRVVLVD DVMTSGASLF AAAQALRDAG
AARITAVVLA RTPPA
|
|---|
| |