Gene Pnap_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0869 
Symbol 
ID4688137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp922885 
End bp923904 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID639833865 
Producthypothetical protein 
Protein accessionYP_981107 
Protein GI121603778 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCACT CATCTGTTTT CACCAACGCT TCACGCCGCC ATTTCAGCTT CGGCGCGCTG 
GCCTCTGCTG CGCTGTTGGG GAGCGGCCTG CTGGCGGCCG TGCCCGCAGC GGCACAGGCT
GCCTACCCGA GCAAGACCAT CACCATCATC GTGCCCTTTG CGGCCGGCGG CACCACCGAC
ATCCTGGCGC GCATCGTCGG CCAGGCGCTG ACTGCCGAAC TGGGCCAGAC CGTCATTGTT
GACAACCGCG CCGGCGCCGG CGGCAACATC GGCGGCCAGG CGGCGGCCCG GGCGGCGGCT
GACGGCTACA CGCTGTTCAT GGGCACGGTC GGCACGCATG CGATCAATGC CAGCCTGTAC
AAGAAAATGC CGTTTGACCC GGTCAAGGAC TTTGCGCCGC TGACGCGCGT GGCCAATGTG
CCCAACCTGC TGGTCGCCAA CCCGGCGCAG CCCTTCAAGA CCGTCAAGGA ACTGATCGCC
TACGCCAAGG CCAATCCGGG CAAGCTCAAC TTTGGCTCGT CGGGCAACGG CAGCTCCATC
CACCTGTCGG GCGAGTTGTT CAAGTCGATG GCGAAAGTCG ATATGCAGCA TGTTCCCTAC
AAGGGCAGCG CCCCGGCCAT GACCGACCTG CTGGGCAACC AGGTCGCCAT CATGTTCGAC
AACATGCCGT CGGCCATCCA GCATGTGCGT TCGGGCAAGC TGCGCGCCAT TGCCGTGACC
ACCGCCAAAC GCTCGCCCGA ACTGCCTGAC GTGCCGACCA TCGCCGAGGC CGGCGTTCCC
GGCTACGAGG CGACCTCGTG GTTCGGCTTG TTCGCGCCGG CCGCCACGCC GCCCGCCGTG
GTCACCCGGC TGAACACCGC CATCGCCAAG GTGCTGGCCA AGCCCGAAGT CAAAAAACAG
ATCAATGAGC AGGGCGCCGA GGTGTACAGC GAAACGCCGG CGCAGTTTGC CGCCTTCATC
CAGAAGGAAT CGGCGAAATG GAGCAAGGTC GTGAAGGAGT CCGGCGCGAG CCTGGACTGA
 
Protein sequence
MSHSSVFTNA SRRHFSFGAL ASAALLGSGL LAAVPAAAQA AYPSKTITII VPFAAGGTTD 
ILARIVGQAL TAELGQTVIV DNRAGAGGNI GGQAAARAAA DGYTLFMGTV GTHAINASLY
KKMPFDPVKD FAPLTRVANV PNLLVANPAQ PFKTVKELIA YAKANPGKLN FGSSGNGSSI
HLSGELFKSM AKVDMQHVPY KGSAPAMTDL LGNQVAIMFD NMPSAIQHVR SGKLRAIAVT
TAKRSPELPD VPTIAEAGVP GYEATSWFGL FAPAATPPAV VTRLNTAIAK VLAKPEVKKQ
INEQGAEVYS ETPAQFAAFI QKESAKWSKV VKESGASLD