| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0861 |
|---|
| Symbol | |
|---|
| ID | 4688069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 916879 |
|---|
| End bp | 917556 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639833857 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_981099 |
|---|
| Protein GI | 121603770 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGC TGTTCACCTC GATATTTGTC CTGGCTGTCT CTTCGGTGAC GGTTGCAAGC
CTTGCCCAGG ACATCAAGGG CGATGCCAAT GCAGGCCAGA CCAAGAATGC CATGTGCATC
GGCTGCCACG GCATCAAGGG CTACCAGTCG TCCTTTCCCG AGGTGTACAA GGTTCCCATG
ATTTCAGGCC AGAACGCCGG CTATATTTCT GCTGCGCTGC ATGAGTATAA AAAAGGTAAT
CGCAAGCATC CCACCATGCG CAGCATCGCC GATACGCTGA ACGACCAGGA TATTGCCGAC
CTGGCCGCTT ACTACAGCAC GCATGGCGTG GTGGCCGGTG CGGAGCTTCC CGCCAAGCCG
GCAAAAGAGC CCAGTGTTGA AGTTCAGGCC CTGCTGAACA AAGCCAATTG CGCGTCATGC
CACGGCGCCA ATTTCAGCCA GCCCATCGAC CCTTCCTACC CCAAGATTGC GGGCCAGCAT
GCCGACTACC TGTTCGTGGC GCTGAAGGCC TACAAGGCCG ACAACGGCGC CAATGCCAAC
GCAAAGGTCG GCCGCGCCCA CCCCATCATG GGCGGCATGG CCAAGCAGTA CACCAATGCC
GAACTCAAGG CCATGGCCAA CTACCTGTCA TCCGTGCCGG GCGACCTCAA GGTGATTCCC
GAAAGCCGCT TCCGCTAA
|
|---|
| Protein sequence | MNKLFTSIFV LAVSSVTVAS LAQDIKGDAN AGQTKNAMCI GCHGIKGYQS SFPEVYKVPM
ISGQNAGYIS AALHEYKKGN RKHPTMRSIA DTLNDQDIAD LAAYYSTHGV VAGAELPAKP
AKEPSVEVQA LLNKANCASC HGANFSQPID PSYPKIAGQH ADYLFVALKA YKADNGANAN
AKVGRAHPIM GGMAKQYTNA ELKAMANYLS SVPGDLKVIP ESRFR
|
|---|
| |