Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0855 |
Symbol | |
ID | 4687951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 905437 |
End bp | 907767 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639833850 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_981093 |
Protein GI | 121603764 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAATG AAATGATCTC AAGCCTGAAT GCGTGTTCTT TCATTGGCGG CAATGCCCCT CTTCAAATGC CTGAAAAACT GACCGAACCT GTTTTGGCGC CGCCCGTGCC GGAATTTTTG GCTCATGGCG GCGAGATGGG CGCCCTCATC AGCGCTCAGG ACTGGAGCGG AACCGCGCTG GGTGCGCCTG CCAGCTGGCC ACGCACTCTC AAGAGCATGC TGGCCACACT CCTCAGCAGC CCCCAGCCCA TGATCATCGG CTGGGGCTCG GACCTTCTTT CATTCTTCAA CGACAGCTAC CGCCCCATGC TCGGCCTGCG CTTTGACGGT TTGTCCGGCC GGCCCGCCGC CGAACAATGG ACTGCTTCAT GGGCCGAACT TGAGCCGATG GCGAAGAAAG CACTGGGCGG TGAGGGTTCG CACTACGAGA ACATGCCCTT CACCCTGACG CGCAACGGTT ACACGGTGCC GACCTGGTGG ACGCTTTCCT TCATGCCATT TCGCGATGAC GATGGTGCTG TGGTCGGCGT CTATTGCTTT CCCATCGAGA CCACGCAAAA CGTGCTGATC GAGCAGCGCA GGGAGCAAGA GCAAAAACGG CAGGCGTTTC GGGTGAAGCT CGGCGATGCC CTGCGGGACG CGATTGAGCC GAAGTCGCTG ATGATGGCCG CAGCCGAAAA GCTCGGCGTG CACCTGCACG CAGCTTGCGT CGGCCATGGC GAAATTGATG CGTCGGGCGA GCGGGTGCAG ATTCACCATG CCTGGATGGC CGAAGGTTCC CCCGCCTTGG TGGGCGCCCA CCCGCTTGAT ATCTACGGGC CGGCGGTGAT TGCCGGCTTG CGGGCCGGCC GGACCGTGGT GGTGAACGAC ACTGCCAGCG ACCCGCTCAC GGCCTGGGCG GCTTGCGATG CGGCTGGCGG GTCAATCGCT GCCCGGGCAT TCGTTGCCGC CCCCTTGGTC AAGAACGGCC GTCTTGCCCT GATCTTTTTT GTGCTTGATC CCCGGCCACG CCTCTGGACG CATGACGAGA AGGCGCTGGT CGAGGAAGTC GCCGAGCGGA CCTGGACTTC GCTGGCGCGG CTGCGTGCAG AACTCGACGT CCACCAGATG AACAGAACGC TCGACCAGCG CACGACCGAA TTGTTGCGCG CCGAGACTGC GCTGCGGCAA TCGCAAAAGC TTGAGGCGCT GGGCCAGCTC ACGGGTGGGG TCGCCCATGA CTTCAACAAC CTTCTGGCGG TGATCAGTTC CTCGGTCGAG TTGCTGCGCA GTAACAAGCT TCCCGTGGAG CGCCACGGCT ATTACCTGGA CCTGATTTAT GACACGGTGG GCCGCGCCGT GAAACTCACC GGGCAGCTGC TGGCTTTCGC CCGGCAAGAG CCTCTGAGCC CCGAGGTGTT CGACGTGGAC CTGCAGGTGC AAGTCGTGGT CGATCTGGTG CGCCCGCTGA TGGGCAGGCA GGTCAATATC CTTTATCAGC CCTGCGGCCG AAACGCCTGT GTCGCCGAGG CGGACATCAA CCAGTTTGAA ACCGCGCTGG TCAACCTCGC CATCAACGCG CGGGACGCGA TGAGCGCAAA CGGCCAGCTC ATCATCAACG TGCAGCAGAC CGGCAGCCTG CCGGCTGGCC CGGGCCACGG CCCCCGGGCA GGGGATTTCA TTGCCATTTC GGTCAGCGAC ACCGGCTGCG GCATTGCGTC CGAAAAACTG GAGATGATTT TCGAGCCCTT CTACACCACC AAAGCGGTGG GCAAGGGCAC AGGCCTGGGC CTGAGCCAGG TGTTCGGCTT TGCCAAGCAG TCAGGCGGTG CGGTCCATGT CCGCAGCGAG CTGGGCAGGG GTTCTGTTTT TACCCTTTAC CTGCCACGCG CCGAGAGCGA ACTCCCCGCA AAAGCATGGG CGCAATGTCC AGAGCAAGGC GCTGATGACG GGGGCTTGGG CGTGCTGGTC GTGGAGGACA ACGAAACCCT GGCACAGATG ACCTGCGAGA TACTGGACGC CCTGGGTTAC CGGACGGTCT GGGCGGTCAA TGCAGCGTCC GCGCTGGCCC TGCTGGCCGG TGGCAAAAAC CGCTTTGACC TGGTTTTCTC CGACGTGGTC ATGCCTGGCA TGAACGGGAT CGAGTTCGGT GAGCAGGTGC GCAAGCATCA TCCCGGGCTT CCCGTGGTGC TGGCCAGCGG CTACAACGCG GTCATGGCCG AACAGGGGCC GCATGGGTTT GAACTGATCT TGAAACCCTA CACGACCGAT ACCCTGGTGC GGGTCTTTCG CAAGGCCATC GCGGAGCAGA CATTGCCGCC GGTCTTGTCG GGCAGTGATG CGGCTGGGTA A
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Protein sequence | MQNEMISSLN ACSFIGGNAP LQMPEKLTEP VLAPPVPEFL AHGGEMGALI SAQDWSGTAL GAPASWPRTL KSMLATLLSS PQPMIIGWGS DLLSFFNDSY RPMLGLRFDG LSGRPAAEQW TASWAELEPM AKKALGGEGS HYENMPFTLT RNGYTVPTWW TLSFMPFRDD DGAVVGVYCF PIETTQNVLI EQRREQEQKR QAFRVKLGDA LRDAIEPKSL MMAAAEKLGV HLHAACVGHG EIDASGERVQ IHHAWMAEGS PALVGAHPLD IYGPAVIAGL RAGRTVVVND TASDPLTAWA ACDAAGGSIA ARAFVAAPLV KNGRLALIFF VLDPRPRLWT HDEKALVEEV AERTWTSLAR LRAELDVHQM NRTLDQRTTE LLRAETALRQ SQKLEALGQL TGGVAHDFNN LLAVISSSVE LLRSNKLPVE RHGYYLDLIY DTVGRAVKLT GQLLAFARQE PLSPEVFDVD LQVQVVVDLV RPLMGRQVNI LYQPCGRNAC VAEADINQFE TALVNLAINA RDAMSANGQL IINVQQTGSL PAGPGHGPRA GDFIAISVSD TGCGIASEKL EMIFEPFYTT KAVGKGTGLG LSQVFGFAKQ SGGAVHVRSE LGRGSVFTLY LPRAESELPA KAWAQCPEQG ADDGGLGVLV VEDNETLAQM TCEILDALGY RTVWAVNAAS ALALLAGGKN RFDLVFSDVV MPGMNGIEFG EQVRKHHPGL PVVLASGYNA VMAEQGPHGF ELILKPYTTD TLVRVFRKAI AEQTLPPVLS GSDAAG
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