| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0812 |
|---|
| Symbol | |
|---|
| ID | 4686403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 855615 |
|---|
| End bp | 856532 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639833809 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981052 |
|---|
| Protein GI | 121603723 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1561] Uncharacterized stress-induced protein |
|---|
| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTT ACAGCATGAC GGGCTATGCA AGCCTGCAAT CCAGCACGGC GCAAGCGACA
AACGAGACCG AACCGGCACG CGACACCAGT TTGCGGCTGG GCGTTGAAAT CCGTTCGGTC
AACAGCCGGT TTCTGGACCT GGCGTTTCGC CTGCCCGATG AGTTGCGCCA GATTGAGCCG
GCGTTGCGCG AACTGCTGAC CGGCAAGCTC AAGCGCGGCA AGGTGGAGGT GCGGATTTCG
CTGGAAAGCG CGGCGGCCAG CAACCTGCGC GCACCGTCCC CCGCGACCTT GCAGCGGCTC
GGTTCGCTGG AGGACAGCAT CAAGTCATGG TTGCCGCAGG CCGCGCCGCT CAGCGTGGCC
GATGTTCTGC GGATCGCCAC CAATGAAGAC AAAAAGCCGC ACGACCACAG CGAGGAGCTG
CTTCAGCTGG CCCGGCAGGC GGTGAATGAG CTGATGTCTG CCCGCGAGCG CGAAGGCGCC
CGGCTGGCCC TCATGCTGCT CGACCGTACC GCGCAGCTGC GCACGCTGGC GGAATCAGCG
GTGCCCATGG TTCCCAAGCT GGTCGAGCAG CAAAAAAACC GTTTCCTGGA GCGCTGGAAA
GAAGCTTTGA CGCTGGGAAG CAGCAACGTG CTTCCTGAAA TTGCCCAGGA TCGGGCACTG
ACCGAGGCGA CCGCCTTTGC CATCCGGATC GACGTGGCGG AAGAAATCAC CCGCCTGGCA
TCGCACCTGG ATGAAATCGA CCGCTTGCTG GCCAGCGGCG GCGAACTGGG CAAGCGCCTG
GACTTCCTGA TTCAGGAACT TCACCGCGAG GCCAATACCC TGGGCTCCAA GTCAGCCTCG
CTGGAACTGA CGCGCGTGTC CGTCGATATG AAAGTATTGA TCGAGCAGAT TCGCGAGCAG
GTGCAGAACA TCGAGTAA
|
|---|
| Protein sequence | MSVYSMTGYA SLQSSTAQAT NETEPARDTS LRLGVEIRSV NSRFLDLAFR LPDELRQIEP
ALRELLTGKL KRGKVEVRIS LESAAASNLR APSPATLQRL GSLEDSIKSW LPQAAPLSVA
DVLRIATNED KKPHDHSEEL LQLARQAVNE LMSAREREGA RLALMLLDRT AQLRTLAESA
VPMVPKLVEQ QKNRFLERWK EALTLGSSNV LPEIAQDRAL TEATAFAIRI DVAEEITRLA
SHLDEIDRLL ASGGELGKRL DFLIQELHRE ANTLGSKSAS LELTRVSVDM KVLIEQIREQ
VQNIE
|
|---|
| |