Gene Pnap_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0810 
Symbol 
ID4689547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp854713 
End bp854916 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content55% 
IMG OID639833807 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_981050 
Protein GI121603721 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA TCACTGTCGA AGATTGCCTG GAAAAAATCC CGAACCGCTT TCAGTTGGTC 
CTGGCAGCCA CTTACCGTGC GCGCATGCTC AGCCAGGGTC ATGCCGCCAG GATTGAGAGC
AAGAACAAGC CTGCAGTTAC CGCACTGCGA GAGATTGCGG CAGGCAAGGT CGGCCTGGAA
ATGCTGAAAA AAGTCCCCAA TTAA
 
Protein sequence
MARITVEDCL EKIPNRFQLV LAATYRARML SQGHAARIES KNKPAVTALR EIAAGKVGLE 
MLKKVPN