| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0804 |
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| Symbol | |
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| ID | 4690150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 847025 |
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| End bp | 848146 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833801 |
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| Product | porin |
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| Protein accession | YP_981044 |
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| Protein GI | 121603715 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT CAACCCTTAT CGCCCTGACA GGCCTGGCCA CCACAGGCGC AGTGCAAGCG
CAAAGCAGTG TCACCCTTTA CGGCATGGTG GACGCGGGTG TTGAGTATGT GACCCATGTG
GCGCCGGCCG GCGGCTCCCT CACGCGCATG CCTTCGAACA CCGGCATCCT GCCCTCGCGC
TTCGGGCTGC GCGGCAAGGA AGACCTGGGC GGCGGCCTGA GCGCGGTTTA CACGCTTGAG
ATGGGTTTTG CGCCCGACAC CGGCGCTTCG GGACAAGGCG GGCGGTTGTT CGGACGGCAA
TCGACGGTGG GCCTGAGCGG CGACTGGGGT GCGGTCACGC TGGGCCGCCA GTGGACCATG
CTGTTCTGGT CGCTGCTTGA TTCGGACCTC GTCGGCCCCA GCATCTATGG CCTGGGCTCG
CTGGACAGCT ACATCCCCAA TTCGCGCATC GACAACTCGA TCGCGTACAA GGGGAAATTC
AGCGACTTCA CCGTGGGCGC CACCTACAGC GCCGGTCGTG ACACCGTCAA TGCCGGCCCA
TCGCCTGCCG GAACCAATTG CCCGGGTGAA AACGGAGCGG ACTCCAAAGC CTGCCGCGAG
TGGTCGGCCC TGGTGAAGTA CGACACCAAG ACCTGGGGCG CCGCGCTGGC TTACGACGAA
ATGAATGGCC GCACGCCTGC CAGCGCGACC GATGTGGTGC TGCCTGCCGG CTTGACAAGC
AGTTCGAAAT CCGACTCCCG ACTGATGGTG AACGGCTACG TGAACCTTGC CGCTTTGAAA
ATTGGCGGTG GCCTCATCCG CCGTAAAAAC GAAGGTAGCG TGACGCGCCC CAAAAGCGAC
CTGTGGTACA TCGGAGCGGC TTACCCGCTG ACTTCGGCCT GGACGATTGA CGGAACTGTC
GCCAAGCTGA GCTACAAGAA CTTCGATAAC GCTGACTCCA CGCTGCTGGC GGTGCGGTCC
CTGTACAAGC TGTCCAAACG CACGACCCTG TACGCTCAAA TCGGCACGAT CCGCAACGAC
AGCCTGGTCA ATGTTTCTGT CAGCGGCGGC GCACCGGGCA GCAACCCAGC CCTGGGTGGA
TCGCAGACCG GGACGATGGT GGGCATCAAC CACACGTTCT AA
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| Protein sequence | MKISTLIALT GLATTGAVQA QSSVTLYGMV DAGVEYVTHV APAGGSLTRM PSNTGILPSR
FGLRGKEDLG GGLSAVYTLE MGFAPDTGAS GQGGRLFGRQ STVGLSGDWG AVTLGRQWTM
LFWSLLDSDL VGPSIYGLGS LDSYIPNSRI DNSIAYKGKF SDFTVGATYS AGRDTVNAGP
SPAGTNCPGE NGADSKACRE WSALVKYDTK TWGAALAYDE MNGRTPASAT DVVLPAGLTS
SSKSDSRLMV NGYVNLAALK IGGGLIRRKN EGSVTRPKSD LWYIGAAYPL TSAWTIDGTV
AKLSYKNFDN ADSTLLAVRS LYKLSKRTTL YAQIGTIRND SLVNVSVSGG APGSNPALGG
SQTGTMVGIN HTF
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