| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0798 |
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| Symbol | |
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| ID | 4688172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 840814 |
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| End bp | 841578 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639833795 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_981038 |
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| Protein GI | 121603709 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.136015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATTC AAGGACAAGC GGCGCTGGTC ACCGGCGGTG GCTCCGGCCT CGGCGAAGCC
ACCGCCCGCG AACTGGCCCG CCTGGGCGCG AAGGTTGCCG TGCTGGACGT GAACCTGGAG
AATGCCCAGC GCGTGGCGGC CGAAATTGGC GGCCTGGCCT GCCAGTGCGA CGTGACCAGC
GGCGACAGCG TGCAAGCGGC CATCGACGCC GCCGCAGCCG CCCATGGCCC GGCCCGCATC
CTGATGCAGA TTGCCGGCAT TGGCGCCGCC AGGCGCGTCA TCGGCAAGGA CGGCTCGCCG
GCGCCGCTGG AGGATTTCAT CAAGGTCGTC AACGTCAACC TGGTCGGCAC CTACAACGTG
GCCCGCCTGT TCTCCGCCGC CTGCGCCAGG CTGGCGCCTA TGGAAGACGG CGAGCGCGGC
GCCATGGTGT TCACCGCCTC GGTGGCGGCC TTTGACGGCC AGGTCGGCCA GCAGGCCTAC
AGCGCCTCCA AGGGCGGCGT GGTCGGCATG ACGCTGCCCA TGGCGCGCGA TCTGGCGCTG
CACGGCATCC GTGTCTGCAC CATCGCGCCG GGCCTGTTTG CCACGCCACT GATGAAAACC
CTGCCCGAGC CGGTGCAGGC CTCGCTGGCC GCGAGCATCC CGTTTCCTTC TCGCCTGGGC
AAGCCGAGCG AGTTTGCCGA GCTGGCCTGC CACATCGTGA GCAACGGCCA CCTGAACGGC
GAAGTGATTC GCCTCGACGG CGCATTGCGC ATGGCCCCGC GTTGA
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| Protein sequence | MHIQGQAALV TGGGSGLGEA TARELARLGA KVAVLDVNLE NAQRVAAEIG GLACQCDVTS
GDSVQAAIDA AAAAHGPARI LMQIAGIGAA RRVIGKDGSP APLEDFIKVV NVNLVGTYNV
ARLFSAACAR LAPMEDGERG AMVFTASVAA FDGQVGQQAY SASKGGVVGM TLPMARDLAL
HGIRVCTIAP GLFATPLMKT LPEPVQASLA ASIPFPSRLG KPSEFAELAC HIVSNGHLNG
EVIRLDGALR MAPR
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