Gene Pnap_0785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0785 
Symbol 
ID4687776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp828532 
End bp828894 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content60% 
IMG OID639833781 
ProductFmdB family regulatory protein 
Protein accessionYP_981025 
Protein GI121603696 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCT ATGCTTACAA ATGCGAATCC TGCGGATTTG CCAAGGACGT CCTGCAAAAA 
ATGTCGGATA CACCCTTGTC GGTATGCCCG CAATGCGGCG TATCCAGCTT CAAGAAGCAG
TTGACCGCCG CTGGTTTTCA GCTCAAGGGT TCGGGCTGGT ATGTGACTGA TTTTCGCGGC
GGCAACAACG CCGCGCCAGC CGCCAAGTCG GCCGATACCC CGACAGCTGC ACCGGCCGCA
AGCAAGTCCA CCGACACCAC TTCCGCGTCG GCAGGCGCCT CGACCGCAGC AAGCCCTGCG
CCAGCTGCAG CACCGTCCAG CAGCAAGAGC ACCAGCGGCG ACGCTTCCAC CAAATCCTCA
TGA
 
Protein sequence
MPIYAYKCES CGFAKDVLQK MSDTPLSVCP QCGVSSFKKQ LTAAGFQLKG SGWYVTDFRG 
GNNAAPAAKS ADTPTAAPAA SKSTDTTSAS AGASTAASPA PAAAPSSSKS TSGDASTKSS